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SparseSignatures: An R package using LASSO-regularized non-negative matrix factorization to identify mutational signatures from human tumor samples.
Mella, Lorenzo; Lal, Avantika; Angaroni, Fabrizio; Maspero, Davide; Piazza, Rocco; Sidow, Arend; Antoniotti, Marco; Graudenzi, Alex; Ramazzotti, Daniele.
Affiliation
  • Mella L; Department of Biomedical Sciences, Humanitas University, Rozzano, Italy.
  • Lal A; Insitro, 279 E Grand Avenue, South San Francisco, CA, USA.
  • Angaroni F; Department of Informatics, Systems and Communication, Università degli Studi di Milano-Bicocca, Milan, Italy.
  • Maspero D; Department of Informatics, Systems and Communication, Università degli Studi di Milano-Bicocca, Milan, Italy.
  • Piazza R; Department of Medicine and Surgery, Università degli Studi di Milano-Bicocca, Milan, Italy; Bicocca Bioinformatics Biostatistics and Bioimaging Centre - B4, Milan, Italy.
  • Sidow A; Department of Pathology, Stanford University, Stanford, CA, USA.
  • Antoniotti M; Department of Informatics, Systems and Communication, Università degli Studi di Milano-Bicocca, Milan, Italy; Bicocca Bioinformatics Biostatistics and Bioimaging Centre - B4, Milan, Italy. Electronic address: marco.antoniotti@unimib.it.
  • Graudenzi A; Department of Informatics, Systems and Communication, Università degli Studi di Milano-Bicocca, Milan, Italy; Bicocca Bioinformatics Biostatistics and Bioimaging Centre - B4, Milan, Italy; Institute of Molecular Bioimaging and Physiology, National Research Council (IBFM-CNR), Segrate, Italy. Electro
  • Ramazzotti D; Department of Medicine and Surgery, Università degli Studi di Milano-Bicocca, Milan, Italy. Electronic address: daniele.ramazzotti@unimib.it.
STAR Protoc ; 3(3): 101513, 2022 09 16.
Article in En | MEDLINE | ID: mdl-35779264
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Neoplasms Type of study: Diagnostic_studies / Prognostic_studies Limits: Humans Language: En Journal: STAR Protoc Year: 2022 Document type: Article Affiliation country: Italy Country of publication: United States
Fulltext
Add to My VHL
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Neoplasms Type of study: Diagnostic_studies / Prognostic_studies Limits: Humans Language: En Journal: STAR Protoc Year: 2022 Document type: Article Affiliation country: Italy Country of publication: United States