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The Analysis of SNPs' Function in miR-21 and miR146a/b in Multiple Sclerosis and Active Lesions: An In Silico Study.
Moraghebi, Mahta; Negahi, Ahmad Agha; Bazireh, Homa; Abbasi, Hossein; Ahmadi, Mohsen; Sarikhani, Zohreh; Mousavi, Pegah.
Affiliation
  • Moraghebi M; Student Research Committee, Hormozgan University of Medical Sciences, Bandar Abbas, Iran.
  • Negahi AA; Department of Internal Medicine, Faculty of Medicine, Hormozgan University of Medical Sciences, Bandar Abbas, Iran.
  • Bazireh H; Student Research Committee, Hormozgan University of Medical Sciences, Bandar Abbas, Iran.
  • Abbasi H; Department of Bioprocess Engineering, National Institute of Genetic Engineering and Biotechnology, Tehran, Iran.
  • Ahmadi M; Student Research Committee, Hormozgan University of Medical Sciences, Bandar Abbas, Iran.
  • Sarikhani Z; Student Research Committee, Hormozgan University of Medical Sciences, Bandar Abbas, Iran.
  • Mousavi P; Division of Medical Genetics, Booali Medical Diagnostic Laboratory, Qom, Iran.
Bioinform Biol Insights ; 16: 11779322221116322, 2022.
Article in En | MEDLINE | ID: mdl-35958297
ABSTRACT
Multiple sclerosis (MS) is a central nervous disorder caused by several factors. Studies have recently shown that non-coding RNA such as miRNA could participate in MS initiation, progression, and active lesion. This study aims to theoretically analyze the potential impact of single-nucleotide polymorphisms (SNPs) on mir-21 and mir-146a/b, which has been previously demonstrated as MS microRNA signature. To fulfill this purpose, the SNPs were investigated for functionality through several online tools, including miRNA-SNP, SNP2-TFBS, RBP-Var, and RNAfold. Furthermore, SNPs of miR-21 and miR-146a/b that exist in pre-miRNA, mature miRNA, and promoter area were extracted; moreover, miRNA and RNA-binding protein interactions were analyzed. This article presented a list of validated SNPs that could affect the expression or function of miR-21 and miR-146a/b for the future practical study of MS and active lesions.
Key words

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Bioinform Biol Insights Year: 2022 Document type: Article Affiliation country: Iran

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Bioinform Biol Insights Year: 2022 Document type: Article Affiliation country: Iran