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Structure-based drug discovery of a corticotropin-releasing hormone receptor 1 antagonist using an X-ray free-electron laser.
Kim, Hoyoung; Lim, Taehyun; Ha, Go Eun; Lee, Jee-Young; Kim, Jun-Woo; Chang, Nienping; Kim, Si Hyun; Kim, Ki Hun; Lee, Jaeick; Cho, Yongju; Kim, Byeong Wook; Abrahamsson, Alva; Kim, Sung Hwan; Kim, Hyo-Ji; Park, Sehan; Lee, Sang Jae; Park, Jaehyun; Cheong, Eunji; Kim, B Moon; Cho, Hyun-Soo.
Affiliation
  • Kim H; Department of Systems Biology, College of Life Science and Biotechnology, Yonsei University, 50 Yonsei-ro, Seoul, 03722, Republic of Korea.
  • Lim T; Department of Chemistry, College of Natural Sciences, Seoul National University, Seoul, 08826, Republic of Korea.
  • Ha GE; Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, 03722, Republic of Korea.
  • Lee JY; New Drug Development Center (NDDC), Daegu Gyeongbuk Medical Innovation Foundation (K-Medi hub), 80 Chumbok-ro, Dong-gu, Daegu, 41061, Korea.
  • Kim JW; New Drug Development Center (NDDC), Daegu Gyeongbuk Medical Innovation Foundation (K-Medi hub), 80 Chumbok-ro, Dong-gu, Daegu, 41061, Korea.
  • Chang N; Department of Systems Biology, College of Life Science and Biotechnology, Yonsei University, 50 Yonsei-ro, Seoul, 03722, Republic of Korea.
  • Kim SH; Doping Control Center, Korea Institute of Science and Technology, Seoul, 02792, Republic of Korea.
  • Kim KH; Department of Chemistry, Sogang University, Seoul, 04107, Republic of Korea.
  • Lee J; Doping Control Center, Korea Institute of Science and Technology, Seoul, 02792, Republic of Korea.
  • Cho Y; Doping Control Center, Korea Institute of Science and Technology, Seoul, 02792, Republic of Korea.
  • Kim BW; Department of Systems Biology, College of Life Science and Biotechnology, Yonsei University, 50 Yonsei-ro, Seoul, 03722, Republic of Korea.
  • Abrahamsson A; Department of Chemistry, College of Natural Sciences, Seoul National University, Seoul, 08826, Republic of Korea.
  • Kim SH; Department of Chemistry, College of Natural Sciences, Seoul National University, Seoul, 08826, Republic of Korea.
  • Kim HJ; New Drug Development Center (NDDC), Daegu Gyeongbuk Medical Innovation Foundation (K-Medi hub), 80 Chumbok-ro, Dong-gu, Daegu, 41061, Korea.
  • Park S; New Drug Development Center (NDDC), Daegu Gyeongbuk Medical Innovation Foundation (K-Medi hub), 80 Chumbok-ro, Dong-gu, Daegu, 41061, Korea.
  • Lee SJ; Pohang Accelerator Laboratory, POSTECH, Pohang, 37673, Republic of Korea.
  • Park J; Pohang Accelerator Laboratory, POSTECH, Pohang, 37673, Republic of Korea.
  • Cheong E; Pohang Accelerator Laboratory, POSTECH, Pohang, 37673, Republic of Korea.
  • Kim BM; Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, 03722, Republic of Korea. eunjicheong@yonsei.ac.kr.
  • Cho HS; Department of Chemistry, College of Natural Sciences, Seoul National University, Seoul, 08826, Republic of Korea. kimbm@snu.ac.kr.
Exp Mol Med ; 55(9): 2039-2050, 2023 09.
Article in En | MEDLINE | ID: mdl-37653040
Thus far, attempts to develop drugs that target corticotropin-releasing hormone receptor 1 (CRF1R), a drug target in stress-related therapy, have been unsuccessful. Studies have focused on using high-resolution G protein-coupled receptor (GPCR) structures to develop drugs. X-ray free-electron lasers (XFELs), which prevent radiation damage and provide access to high-resolution compositions, have helped accelerate GPCR structural studies. We elucidated the crystal structure of CRF1R complexed with a BMK-I-152 antagonist at 2.75 Å using fixed-target serial femtosecond crystallography. The results revealed that two unique hydrogen bonds are present in the hydrogen bond network, the stalk region forms an alpha helix and the hydrophobic network contains an antagonist binding site. We then developed two antagonists-BMK-C203 and BMK-C205-and determined the CRF1R/BMK-C203 and CRF1R/BMK-C205 complex structures at 2.6 and 2.2 Å, respectively. BMK-C205 exerted significant antidepressant effects in mice and, thus, may be utilized to effectively identify structure-based drugs against CRF1R.
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Corticotropin-Releasing Hormone / Electrons Type of study: Prognostic_studies Limits: Animals Language: En Journal: Exp Mol Med Journal subject: BIOLOGIA MOLECULAR / BIOQUIMICA Year: 2023 Document type: Article Country of publication: United States

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Corticotropin-Releasing Hormone / Electrons Type of study: Prognostic_studies Limits: Animals Language: En Journal: Exp Mol Med Journal subject: BIOLOGIA MOLECULAR / BIOQUIMICA Year: 2023 Document type: Article Country of publication: United States