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Exome-wide benchmark of difficult-to-sequence regions using short-read next-generation DNA sequencing.
Hijikata, Atsushi; Suyama, Mikita; Kikugawa, Shingo; Matoba, Ryo; Naruto, Takuya; Enomoto, Yumi; Kurosawa, Kenji; Harada, Naoki; Yanagi, Kumiko; Kaname, Tadashi; Miyako, Keisuke; Takazawa, Masaki; Sasai, Hideo; Hosokawa, Junichi; Itoga, Sakae; Yamaguchi, Tomomi; Kosho, Tomoki; Matsubara, Keiko; Kuroki, Yoko; Fukami, Maki; Adachi, Kaori; Nanba, Eiji; Tsuchida, Naomi; Uchiyama, Yuri; Matsumoto, Naomichi; Nishimura, Kunihiro; Ohara, Osamu.
Affiliation
  • Hijikata A; Laboratory of Computational Genomics, School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, Hachioji, Tokyo 192-0392, Japan.
  • Suyama M; Division of Bioinformatics, Medical Institute of Bioregulation, Kyushu University, Higashi-ku, Fukuoka 812-8582, Japan.
  • Kikugawa S; DNA Chip Research Inc., Minato-ku, Tokyo 105-0022, Japan.
  • Matoba R; DNA Chip Research Inc., Minato-ku, Tokyo 105-0022, Japan.
  • Naruto T; Clinical Research Institute, Kanagawa Children's Medical Center, Minami-ku, Yokohama, Kanagawa 232-0066, Japan.
  • Enomoto Y; Clinical Research Institute, Kanagawa Children's Medical Center, Minami-ku, Yokohama, Kanagawa 232-0066, Japan.
  • Kurosawa K; Clinical Research Institute, Kanagawa Children's Medical Center, Minami-ku, Yokohama, Kanagawa 232-0066, Japan.
  • Harada N; Division of Medical Genetics, Kanagawa Children's Medical Center, Minami-ku, Yokohama, Kanagawa 232-0066, Japan.
  • Yanagi K; Department of Fundamental Cell Technology, Center for iPS Cell Research and Application (CiRA), Kyoto University, Sakyo-ku, Kyoto 606-8507, Japan.
  • Kaname T; Department of Genome Medicine, National Center for Child Health and Development, Setagaya-ku, Tokyo 157-8535, Japan.
  • Miyako K; Department of Genome Medicine, National Center for Child Health and Development, Setagaya-ku, Tokyo 157-8535, Japan.
  • Takazawa M; Department of Applied Genomics, Kazusa DNA Research Institute, Kisarazu, Chiba 292-0818, Japan.
  • Sasai H; Department of Applied Genomics, Kazusa DNA Research Institute, Kisarazu, Chiba 292-0818, Japan.
  • Hosokawa J; Department of Applied Genomics, Kazusa DNA Research Institute, Kisarazu, Chiba 292-0818, Japan.
  • Itoga S; Department of Pediatrics, Graduate School of Medicine, Gifu University, Gifu, Gifu 501-1194, Japan.
  • Yamaguchi T; Department of Applied Genomics, Kazusa DNA Research Institute, Kisarazu, Chiba 292-0818, Japan.
  • Kosho T; Department of Applied Genomics, Kazusa DNA Research Institute, Kisarazu, Chiba 292-0818, Japan.
  • Matsubara K; Department of Medical Genetics, Shinshu University School of Medicine, Matsumoto, Nagano 390-8621, Japan.
  • Kuroki Y; Center for Medical Genetics, Shinshu University Hospital, Matsumoto, Nagano 390-8621, Japan.
  • Fukami M; Division of Clinical Sequencing, Shinshu University School of Medicine, Matsumoto, Nagano 390-8621, Japan.
  • Adachi K; Department of Medical Genetics, Shinshu University School of Medicine, Matsumoto, Nagano 390-8621, Japan.
  • Nanba E; Center for Medical Genetics, Shinshu University Hospital, Matsumoto, Nagano 390-8621, Japan.
  • Tsuchida N; Division of Clinical Sequencing, Shinshu University School of Medicine, Matsumoto, Nagano 390-8621, Japan.
  • Uchiyama Y; Division of Collaborative Research, National Research Institute for Child Health and Development, Setagaya-ku, Tokyo 157-8535, Japan.
  • Matsumoto N; Department of Molecular Endocrinology, National Research Institute for Child Health and Development, Setagaya-ku, Tokyo 157-8535, Japan.
  • Nishimura K; Department of Genome Medicine, National Center for Child Health and Development, Setagaya-ku, Tokyo 157-8535, Japan.
  • Ohara O; Division of Collaborative Research, National Research Institute for Child Health and Development, Setagaya-ku, Tokyo 157-8535, Japan.
Nucleic Acids Res ; 52(1): 114-124, 2024 Jan 11.
Article in En | MEDLINE | ID: mdl-38015437
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Sequence Analysis, DNA / High-Throughput Nucleotide Sequencing / Exome Limits: Humans Language: En Journal: Nucleic Acids Res Year: 2024 Document type: Article Affiliation country: Japan Country of publication: United kingdom
Fulltext
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Sequence Analysis, DNA / High-Throughput Nucleotide Sequencing / Exome Limits: Humans Language: En Journal: Nucleic Acids Res Year: 2024 Document type: Article Affiliation country: Japan Country of publication: United kingdom