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Deep learning algorithm (YOLOv7) for automated renal mass detection on contrast-enhanced MRI: a 2D and 2.5D evaluation of results.
Anari, Pouria Yazdian; Lay, Nathan; Zahergivar, Aryan; Firouzabadi, Fatemeh Dehghani; Chaurasia, Aditi; Golagha, Mahshid; Singh, Shiva; Homayounieh, Fatemeh; Obiezu, Fiona; Harmon, Stephanie; Turkbey, Evrim; Merino, Maria; Jones, Elizabeth C; Ball, Mark W; Linehan, W Marston; Turkbey, Baris; Malayeri, Ashkan A.
Affiliation
  • Anari PY; Radiology and Imaging Sciences, Clinical Center,, National Institutes of Health, 10 Center Drive, 1C352, Bethesda, MD, 20892, USA.
  • Lay N; Artificial Intelligence Resource, National Institutes of Health, Bethesda, USA.
  • Zahergivar A; Radiology and Imaging Sciences, Clinical Center,, National Institutes of Health, 10 Center Drive, 1C352, Bethesda, MD, 20892, USA.
  • Firouzabadi FD; Radiology and Imaging Sciences, Clinical Center,, National Institutes of Health, 10 Center Drive, 1C352, Bethesda, MD, 20892, USA.
  • Chaurasia A; Urology Oncology Branch, National Cancer Institutes, National Institutes of Health, Bethesda, USA.
  • Golagha M; Radiology and Imaging Sciences, Clinical Center,, National Institutes of Health, 10 Center Drive, 1C352, Bethesda, MD, 20892, USA.
  • Singh S; Radiology and Imaging Sciences, Clinical Center,, National Institutes of Health, 10 Center Drive, 1C352, Bethesda, MD, 20892, USA.
  • Obiezu F; Radiology and Imaging Sciences, Clinical Center,, National Institutes of Health, 10 Center Drive, 1C352, Bethesda, MD, 20892, USA.
  • Harmon S; Artificial Intelligence Resource, National Institutes of Health, Bethesda, USA.
  • Turkbey E; Radiology and Imaging Sciences, Clinical Center,, National Institutes of Health, 10 Center Drive, 1C352, Bethesda, MD, 20892, USA.
  • Merino M; Pathology Department, National Cancer Institutes, National Institutes of Health, Bethesda, USA.
  • Jones EC; Radiology and Imaging Sciences, Clinical Center,, National Institutes of Health, 10 Center Drive, 1C352, Bethesda, MD, 20892, USA.
  • Ball MW; Urology Oncology Branch, National Cancer Institutes, National Institutes of Health, Bethesda, USA.
  • Linehan WM; Urology Oncology Branch, National Cancer Institutes, National Institutes of Health, Bethesda, USA.
  • Turkbey B; Artificial Intelligence Resource, National Institutes of Health, Bethesda, USA.
  • Malayeri AA; Radiology and Imaging Sciences, Clinical Center,, National Institutes of Health, 10 Center Drive, 1C352, Bethesda, MD, 20892, USA. ashkan.malayeri@nih.gov.
Abdom Radiol (NY) ; 49(4): 1194-1201, 2024 04.
Article in En | MEDLINE | ID: mdl-38368481
ABSTRACT

INTRODUCTION:

Accurate diagnosis and treatment of kidney tumors greatly benefit from automated solutions for detection and classification on MRI. In this study, we explore the application of a deep learning algorithm, YOLOv7, for detecting kidney tumors on contrast-enhanced MRI. MATERIAL AND

METHODS:

We assessed the performance of YOLOv7 tumor detection on excretory phase MRIs in a large institutional cohort of patients with RCC. Tumors were segmented on MRI using ITK-SNAP and converted to bounding boxes. The cohort was randomly divided into ten benchmarks for training and testing the YOLOv7 algorithm. The model was evaluated using both 2-dimensional and a novel in-house developed 2.5-dimensional approach. Performance measures included F1, Positive Predictive Value (PPV), Sensitivity, F1 curve, PPV-Sensitivity curve, Intersection over Union (IoU), and mean average PPV (mAP).

RESULTS:

A total of 326 patients with 1034 tumors with 7 different pathologies were analyzed across ten benchmarks. The average 2D evaluation results were as follows Positive Predictive Value (PPV) of 0.69 ± 0.05, sensitivity of 0.39 ± 0.02, and F1 score of 0.43 ± 0.03. For the 2.5D evaluation, the average results included a PPV of 0.72 ± 0.06, sensitivity of 0.61 ± 0.06, and F1 score of 0.66 ± 0.04. The best model performance demonstrated a 2.5D PPV of 0.75, sensitivity of 0.69, and F1 score of 0.72.

CONCLUSION:

Using computer vision for tumor identification is a cutting-edge and rapidly expanding subject. In this work, we showed that YOLOv7 can be utilized in the detection of kidney cancers.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Carcinoma, Renal Cell / Deep Learning / Kidney Neoplasms Limits: Humans Language: En Journal: Abdom Radiol (NY) Year: 2024 Document type: Article Affiliation country: United States Country of publication: United States

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Carcinoma, Renal Cell / Deep Learning / Kidney Neoplasms Limits: Humans Language: En Journal: Abdom Radiol (NY) Year: 2024 Document type: Article Affiliation country: United States Country of publication: United States