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On the genetic basis of tail-loss evolution in humans and apes.
Xia, Bo; Zhang, Weimin; Zhao, Guisheng; Zhang, Xinru; Bai, Jiangshan; Brosh, Ran; Wudzinska, Aleksandra; Huang, Emily; Ashe, Hannah; Ellis, Gwen; Pour, Maayan; Zhao, Yu; Coelho, Camila; Zhu, Yinan; Miller, Alexander; Dasen, Jeremy S; Maurano, Matthew T; Kim, Sang Y; Boeke, Jef D; Yanai, Itai.
Affiliation
  • Xia B; Institute for Computational Medicine, NYU Langone Health, New York, NY, USA. xiabo@broadinstitute.org.
  • Zhang W; Institute for Systems Genetics, NYU Langone Health, New York, NY, USA. xiabo@broadinstitute.org.
  • Zhao G; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, USA. xiabo@broadinstitute.org.
  • Zhang X; Society of Fellows, Harvard University, Cambridge, MA, USA. xiabo@broadinstitute.org.
  • Bai J; Institute for Systems Genetics, NYU Langone Health, New York, NY, USA.
  • Brosh R; Institute for Computational Medicine, NYU Langone Health, New York, NY, USA.
  • Wudzinska A; Institute for Systems Genetics, NYU Langone Health, New York, NY, USA.
  • Huang E; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
  • Ashe H; Department of Biology, Pennsylvania State University, University Park, PA, USA.
  • Ellis G; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
  • Pour M; Institute for Systems Genetics, NYU Langone Health, New York, NY, USA.
  • Zhao Y; Institute for Systems Genetics, NYU Langone Health, New York, NY, USA.
  • Coelho C; Institute for Systems Genetics, NYU Langone Health, New York, NY, USA.
  • Zhu Y; Institute for Systems Genetics, NYU Langone Health, New York, NY, USA.
  • Miller A; Institute for Systems Genetics, NYU Langone Health, New York, NY, USA.
  • Dasen JS; Institute for Computational Medicine, NYU Langone Health, New York, NY, USA.
  • Maurano MT; Institute for Systems Genetics, NYU Langone Health, New York, NY, USA.
  • Kim SY; Institute for Systems Genetics, NYU Langone Health, New York, NY, USA.
  • Boeke JD; Institute for Systems Genetics, NYU Langone Health, New York, NY, USA.
  • Yanai I; Institute for Systems Genetics, NYU Langone Health, New York, NY, USA.
Nature ; 626(8001): 1042-1048, 2024 Feb.
Article in En | MEDLINE | ID: mdl-38418917
ABSTRACT
The loss of the tail is among the most notable anatomical changes to have occurred along the evolutionary lineage leading to humans and to the 'anthropomorphous apes'1-3, with a proposed role in contributing to human bipedalism4-6. Yet, the genetic mechanism that facilitated tail-loss evolution in hominoids remains unknown. Here we present evidence that an individual insertion of an Alu element in the genome of the hominoid ancestor may have contributed to tail-loss evolution. We demonstrate that this Alu element-inserted into an intron of the TBXT gene7-9-pairs with a neighbouring ancestral Alu element encoded in the reverse genomic orientation and leads to a hominoid-specific alternative splicing event. To study the effect of this splicing event, we generated multiple mouse models that express both full-length and exon-skipped isoforms of Tbxt, mimicking the expression pattern of its hominoid orthologue TBXT. Mice expressing both Tbxt isoforms exhibit a complete absence of the tail or a shortened tail depending on the relative abundance of Tbxt isoforms expressed at the embryonic tail bud. These results support the notion that the exon-skipped transcript is sufficient to induce a tail-loss phenotype. Moreover, mice expressing the exon-skipped Tbxt isoform develop neural tube defects, a condition that affects approximately 1 in 1,000 neonates in humans10. Thus, tail-loss evolution may have been associated with an adaptive cost of the potential for neural tube defects, which continue to affect human health today.
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Tail / Hominidae / Alternative Splicing / Evolution, Molecular / T-Box Domain Proteins Limits: Animals / Humans Language: En Journal: Nature Year: 2024 Document type: Article Affiliation country: United States

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Tail / Hominidae / Alternative Splicing / Evolution, Molecular / T-Box Domain Proteins Limits: Animals / Humans Language: En Journal: Nature Year: 2024 Document type: Article Affiliation country: United States
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