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Gene identification and enzymatic characterization of the initial enzyme in pyrimidine oxidative metabolism, uracil-thymine dehydrogenase.
Soong, Chee-Leong; Deguchi, Kengo; Takeuchi, Michiki; Kozono, Syoko; Horinouchi, Nobuyuki; Si, Dayong; Hibi, Makoto; Shimizu, Sakayu; Ogawa, Jun.
Affiliation
  • Soong CL; Division of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, Japan.
  • Deguchi K; Division of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, Japan.
  • Takeuchi M; Industrial Microbiology, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, Japan.
  • Kozono S; Division of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, Japan.
  • Horinouchi N; Division of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, Japan.
  • Si D; Division of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, Japan; Laboratory of Feed Biotechnology, State Key Laboratory of Animal Nutrition, College of Animal Science & Technology, China Agricultural University, Beijing 100193, China.
  • Hibi M; Industrial Microbiology, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, Japan; Biotechnology Research Center and Department of Biotechnology, Toyama Prefectural University, Toyama 939-0398, Japan.
  • Shimizu S; Division of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, Japan.
  • Ogawa J; Division of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, Japan. Electronic address: ogawa.jun.8a@kyoto-u.ac.jp.
J Biosci Bioeng ; 137(6): 413-419, 2024 Jun.
Article in En | MEDLINE | ID: mdl-38485553
ABSTRACT
Uracil-thymine dehydrogenase (UTDH), which catalyzes the irreversible oxidation of uracil to barbituric acid in oxidative pyrimidine metabolism, was purified from Rhodococcus erythropolis JCM 3132. The finding of unusual stabilizing conditions (pH 11, in the presence of NADP+ or NADPH) enabled the enzyme purification. The purified enzyme was a heteromer consisting of three different subunits. The enzyme catalyzed oxidation of uracil to barbituric acid with artificial electron acceptors such as methylene blue, phenazine methosulfate, benzoquinone, and α-naphthoquinone; however, NAD+, NADP+, flavin adenine dinucleotide, and flavin mononucleotide did not serve as electron acceptors. The enzyme acted not only on uracil and thymine but also on 5-halogen-substituted uracil and hydroxypyrimidine (pyrimidone), while dihydropyrimidine, which is an intermediate in reductive pyrimidine metabolism, and purine did not serve as substrates. The activity of UTDH was enhanced by cerium ions, and this activation was observed with all combinations of substrates and electron acceptors.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Oxidation-Reduction / Pyrimidines / Uracil / Rhodococcus Language: En Journal: J Biosci Bioeng Journal subject: ENGENHARIA BIOMEDICA / MICROBIOLOGIA Year: 2024 Document type: Article Affiliation country: Japan Country of publication: Japan

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Oxidation-Reduction / Pyrimidines / Uracil / Rhodococcus Language: En Journal: J Biosci Bioeng Journal subject: ENGENHARIA BIOMEDICA / MICROBIOLOGIA Year: 2024 Document type: Article Affiliation country: Japan Country of publication: Japan