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Structurally constrained and pathology-aware convolutional transformer generative adversarial network for virtual histology staining of human coronary optical coherence tomography images.
Li, Xueshen; Liu, Hongshan; Song, Xiaoyu; Marboe, Charles C; Brott, Brigitta C; Litovsky, Silvio H; Gan, Yu.
Affiliation
  • Li X; Stevens Institute of Technology, Department of Biomedical Engineering, Hoboken, New Jersey, United States.
  • Liu H; Stevens Institute of Technology, Semcer Center for Healthcare Innovation, Hoboken, New Jersey, United States.
  • Song X; Stevens Institute of Technology, Department of Biomedical Engineering, Hoboken, New Jersey, United States.
  • Marboe CC; Stevens Institute of Technology, Semcer Center for Healthcare Innovation, Hoboken, New Jersey, United States.
  • Brott BC; Icahn School of Medicine at Mount Sinai, New York, New York, United States.
  • Litovsky SH; Columbia University Medical Center, New York, New York, United States.
  • Gan Y; The University of Alabama at Birmingham, School of Medicine, Birmingham, Alabama, United States.
J Biomed Opt ; 29(3): 036004, 2024 Mar.
Article in En | MEDLINE | ID: mdl-38532927
ABSTRACT

Significance:

There is a significant need for the generation of virtual histological information from coronary optical coherence tomography (OCT) images to better guide the treatment of coronary artery disease (CAD). However, existing methods either require a large pixel-wise paired training dataset or have limited capability to map pathological regions.

Aim:

The aim of this work is to generate virtual histological information from coronary OCT images, without a pixel-wise paired training dataset while capable of providing pathological patterns.

Approach:

We design a structurally constrained, pathology-aware, transformer generative adversarial network, namely structurally constrained pathology-aware convolutional transformer generative adversarial network (SCPAT-GAN), to generate virtual stained H&E histology from OCT images. We quantitatively evaluate the quality of virtual stained histology images by measuring the Fréchet inception distance (FID) and perceptual hash value (PHV). Moreover, we invite experienced pathologists to evaluate the virtual stained images. Furthermore, we visually inspect the virtual stained image generated by SCPAT-GAN. Also, we perform an ablation study to validate the design of the proposed SCPAT-GAN. Finally, we demonstrate 3D virtual stained histology images.

Results:

Compared to previous research, the proposed SCPAT-GAN achieves better FID and PHV scores. The visual inspection suggests that the virtual histology images generated by SCPAT-GAN resemble both normal and pathological features without artifacts. As confirmed by the pathologists, the virtual stained images have good quality compared to real histology images. The ablation study confirms the effectiveness of the combination of proposed pathological awareness and structural constraining modules.

Conclusions:

The proposed SCPAT-GAN is the first to demonstrate the feasibility of generating both normal and pathological patterns without pixel-wisely supervised training. We expect the SCPAT-GAN to assist in the clinical evaluation of treating the CAD by providing 2D and 3D histopathological visualizations.
Subject(s)
Key words

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Coronary Artery Disease / Tomography, Optical Coherence Limits: Humans Language: En Journal: J Biomed Opt Journal subject: ENGENHARIA BIOMEDICA / OFTALMOLOGIA Year: 2024 Document type: Article Affiliation country: United States

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Coronary Artery Disease / Tomography, Optical Coherence Limits: Humans Language: En Journal: J Biomed Opt Journal subject: ENGENHARIA BIOMEDICA / OFTALMOLOGIA Year: 2024 Document type: Article Affiliation country: United States
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