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Biomolecular condensates form spatially inhomogeneous network fluids.
Dar, Furqan; Cohen, Samuel R; Mitrea, Diana M; Phillips, Aaron H; Nagy, Gergely; Leite, Wellington C; Stanley, Christopher B; Choi, Jeong-Mo; Kriwacki, Richard W; Pappu, Rohit V.
Affiliation
  • Dar F; Department of Biomedical Engineering and Center for Biomolecular Condensates, Washington University in St. Louis, St. Louis, MO, 63130, USA.
  • Cohen SR; Department of Biomedical Engineering and Center for Biomolecular Condensates, Washington University in St. Louis, St. Louis, MO, 63130, USA.
  • Mitrea DM; Center of Regenerative Medicine, Washington University in St. Louis, St. Louis, MO, 63130, USA.
  • Phillips AH; Dewpoint Therapeutics Inc., 451 D Street, Boston, MA, 02210, USA.
  • Nagy G; Department of Structural Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
  • Leite WC; Neutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.
  • Stanley CB; Neutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.
  • Choi JM; Computational Sciences and Engineering Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37830, USA.
  • Kriwacki RW; Department of Chemistry and Chemistry Institute for Functional Materials, Pusan National University, Busan, 46241, Republic of Korea. jmchoi@pusan.ac.kr.
  • Pappu RV; Department of Structural Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA. richard.kriwacki@stjude.org.
Nat Commun ; 15(1): 3413, 2024 Apr 22.
Article in En | MEDLINE | ID: mdl-38649740
ABSTRACT
The functions of biomolecular condensates are thought to be influenced by their material properties, and these will be determined by the internal organization of molecules within condensates. However, structural characterizations of condensates are challenging, and rarely reported. Here, we deploy a combination of small angle neutron scattering, fluorescence recovery after photobleaching, and coarse-grained molecular dynamics simulations to provide structural descriptions of model condensates that are formed by macromolecules from nucleolar granular components (GCs). We show that these minimal facsimiles of GCs form condensates that are network fluids featuring spatial inhomogeneities across different length scales that reflect the contributions of distinct protein and peptide domains. The network-like inhomogeneous organization is characterized by a coexistence of liquid- and gas-like macromolecular densities that engenders bimodality of internal molecular dynamics. These insights suggest that condensates formed by multivalent proteins share features with network fluids formed by systems such as patchy or hairy colloids.
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Scattering, Small Angle / Molecular Dynamics Simulation / Biomolecular Condensates Language: En Journal: Nat Commun Journal subject: BIOLOGIA / CIENCIA Year: 2024 Document type: Article Affiliation country: United States

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Scattering, Small Angle / Molecular Dynamics Simulation / Biomolecular Condensates Language: En Journal: Nat Commun Journal subject: BIOLOGIA / CIENCIA Year: 2024 Document type: Article Affiliation country: United States