TLM-Tracker: software for cell segmentation, tracking and lineage analysis in time-lapse microscopy movies.
Bioinformatics
; 28(17): 2276-7, 2012 Sep 01.
Article
en En
| MEDLINE
| ID: mdl-22772947
ABSTRACT
MOTIVATION Time-lapse imaging in combination with fluorescence microscopy techniques enable the investigation of gene regulatory circuits and uncovered phenomena like culture heterogeneity. In this context, computational image processing for the analysis of single cell behaviour plays an increasing role in systems biology and mathematical modelling approaches. Consequently, we developed a software package with graphical user interface for the analysis of single bacterial cell behaviour. RESULTS:
A new software called TLM-Tracker allows for the flexible and user-friendly interpretation for the segmentation, tracking and lineage analysis of microbial cells in time-lapse movies.AVAILABILITY:
The software package, including manual, tutorial video and examples, is available as Matlab code or executable binaries at http//www.tlmtracker.tu-bs.de.
Texto completo:
1
Colección:
01-internacional
Base de datos:
MEDLINE
Asunto principal:
Procesamiento de Imagen Asistido por Computador
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Programas Informáticos
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Microscopía por Video
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Imagen de Lapso de Tiempo
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Análisis de la Célula Individual
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Microscopía Fluorescente
Idioma:
En
Revista:
Bioinformatics
Asunto de la revista:
INFORMATICA MEDICA
Año:
2012
Tipo del documento:
Article
País de afiliación:
Alemania