Association analysis of ERBB2 amplicon genetic polymorphisms and STARD3 expression with risk of gastric cancer in the Chinese population.
Gene
; 535(2): 225-32, 2014 Feb 10.
Article
en En
| MEDLINE
| ID: mdl-24291029
The purpose of this study was to investigate whether risk of gastric cancer (GC) was associated with single nucleotide polymorphisms (SNPs) in a gene cluster on the chromosome 17q12-q21 (ERBB2 amplicon) in the Chinese Han population. We detected twenty-six SNPs in this gene cluster containing steroidogenic acute regulatory-related lipid transfer domain containing 3 (STARD3), protein phosphatase 1 regulatory subunit 1B (PPP1R1B/DARPP32), titin-cap (TCAP), per1-like domain containing 1(PERLD1/CAB2), human epidermal growth factor receptor-2 (ERBB2/HER2), zinc-finger protein subfamily 1A 3 (ZNFN1A3/IKZF3) and DNA topoisomerase 2-alpha (TOP2A) genes in 311 patients with GC and in 425 controls by Sequenom. We found no associations between genetic variations and GC risk. However, haplotype analysis implied that the haplotype CCCT of STARD3 (rs9972882, rs881844, rs11869286 and rs1877031) conferred a protective effect on the susceptibility to GC (P=0.043, odds ratio [OR]=0.805, 95% confidence intervals [95% CI]=0.643-0.992). The STARD3 rs1877031 TC genotype endued histogenesis of gastric mucinous adenocarcinoma and signet-ring cell carcinoma (P=0.021, OR=2.882, 95% CI=1.173-7.084). We examined the expression of STARD3 in 243 tumor tissues out of the 311 GC patients and 20 adjacent normal gastric tissues using immumohistochemical (IHC) analysis and tissue microarrays (TMA). The expression of STARD3 was observed in the gastric parietal cells and in gastric tumor tissues and significantly correlated with gender (P=0.004), alcohol drinking (P<0.001), tumor location (P=0.007), histological type (P=0.005) and differentiation (P=0.023) in GC. We concluded that the combined effect of haplotype CCCT of STARD3 might affect GC susceptibility. STARD3 expression might be related to the tumorigenesis of GC in the Chinese population.
Palabras clave
CI; EDTA; ERBB2; ERBB2 amplicon; GC; GRB7; Gastric cancer; HWE; HapMap; HardyWeinberg equilibrium; IHC; International HapMap Project; LD; MAF; MIEN1; OR; PBS; PCR; PERLD1; PNMT; PPP1R1B; SNP; STARD3; START; Single nucleotide polymorphism; TBE; TCAP; TMA; TOP2A; Tris/borate/EDTA; UTR; ZNFN1A3; confidence interval; epidermal growth factor receptor-2; ethylenediaminetetraacetic acid; gastric cancer; growth factor receptor-bound protein 7; immunohistochemistry; linkage disequilibrium; migration and invasion enhancer 1; minor allele frequency; odds ratio; per1-like domain-containing protein 1; phenylethanolamine N-methyltransferase; phosphate buffer saline; polymerase chain reaction; protein phosphatase 1 regulatory subunit 1B; single nucleotide polymorphism; steroidogenic acute regulatory-related lipid transfer; steroidogenic acute regulatory-related lipid transfer domain-containing 3; tissue microarray; titin-cap; topoisomerase (DNA) II alpha; untranslated regions; zinc-finger protein subfamily 1A3
Texto completo:
1
Colección:
01-internacional
Base de datos:
MEDLINE
Asunto principal:
Polimorfismo Genético
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Neoplasias Gástricas
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Proteínas Portadoras
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Receptor ErbB-2
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Pueblo Asiatico
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Estudios de Asociación Genética
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Proteínas de la Membrana
Tipo de estudio:
Etiology_studies
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Observational_studies
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Prognostic_studies
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Risk_factors_studies
Límite:
Adult
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Aged
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Aged80
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Female
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Humans
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Male
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Middle aged
País/Región como asunto:
Asia
Idioma:
En
Revista:
Gene
Año:
2014
Tipo del documento:
Article
País de afiliación:
China
Pais de publicación:
Países Bajos