PPI layouts: BioJS components for the display of Protein-Protein Interactions.

ABSTRACT

SUMMARY: We present two web-based components for the display of Protein-Protein Interaction networks using different self-organizing layout methods: force-directed and circular. These components conform to the BioJS standard and can be rendered in an HTML5-compliant browser without the need for third-party plugins. We provide examples of interaction networks and how the components can be used to visualize them, and refer to a more complex tool that uses these components. AVAILABILITY: http//github.com/biojs/biojs; http//dx.doi.org/10.5281/zenodo.7753.