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Complete genome sequence of Granulicella tundricola type strain MP5ACTX9(T), an Acidobacteria from tundra soil.
Rawat, Suman R; Männistö, Minna K; Starovoytov, Valentin; Goodwin, Lynne; Nolan, Matt; Hauser, Loren; Land, Miriam; Davenport, Karen Walston; Woyke, Tanja; Häggblom, Max M.
Afiliación
  • Rawat SR; Department of Biochemistry and Microbiology, Rutgers, The State University of New Jersey, New Brunswick, New Jersey USA.
  • Männistö MK; Finnish Forest Research Institute, Rovaniemi, Finland.
  • Starovoytov V; Department of Cell Biology and Neuroscience, Rutgers, The State University of New Jersey, Piscataway, New Jersey, USA .
  • Goodwin L; Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA.
  • Nolan M; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Hauser L; Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.
  • Land M; Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.
  • Davenport KW; Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA.
  • Woyke T; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Häggblom MM; Department of Biochemistry and Microbiology, Rutgers, The State University of New Jersey, New Brunswick, New Jersey USA.
Stand Genomic Sci ; 9(3): 449-61, 2014 Jun 15.
Article en En | MEDLINE | ID: mdl-25197431
Granulicella tundricola strain MP5ACTX9(T) is a novel species of the genus Granulicella in subdivision 1 Acidobacteria. G. tundricola is a predominant member of soil bacterial communities, active at low temperatures and nutrient limiting conditions in Arctic alpine tundra. The organism is a cold-adapted acidophile and a versatile heterotroph that hydrolyzes a suite of sugars and complex polysaccharides. Genome analysis revealed metabolic versatility with genes involved in metabolism and transport of carbohydrates, including gene modules encoding for the carbohydrate-active enzyme (CAZy) families for the breakdown, utilization and biosynthesis of diverse structural and storage polysaccharides such as plant based carbon polymers. The genome of G. tundricola strain MP5ACTX9(T) consists of 4,309,151 bp of a circular chromosome and five mega plasmids with a total genome content of 5,503,984 bp. The genome comprises 4,705 protein-coding genes and 52 RNA genes.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Idioma: En Revista: Stand Genomic Sci Año: 2014 Tipo del documento: Article Pais de publicación: Reino Unido

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Idioma: En Revista: Stand Genomic Sci Año: 2014 Tipo del documento: Article Pais de publicación: Reino Unido