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Parallel detection of ancient pathogens via array-based DNA capture.
Bos, Kirsten I; Jäger, Günter; Schuenemann, Verena J; Vågene, Åshild J; Spyrou, Maria A; Herbig, Alexander; Nieselt, Kay; Krause, Johannes.
Afiliación
  • Bos KI; Department of Archaeological Sciences, University of Tübingen, Tübingen 72070, Germany kirsten.bos@ifu.uni-tuebingen.de.
  • Jäger G; Centre for Bioinformatics Tübingen (ZBIT), University of Tübingen, Tübingen 72070, Germany.
  • Schuenemann VJ; Department of Archaeological Sciences, University of Tübingen, Tübingen 72070, Germany.
  • Vågene ÅJ; Department of Archaeological Sciences, University of Tübingen, Tübingen 72070, Germany.
  • Spyrou MA; Department of Archaeological Sciences, University of Tübingen, Tübingen 72070, Germany.
  • Herbig A; Department of Archaeological Sciences, University of Tübingen, Tübingen 72070, Germany Centre for Bioinformatics Tübingen (ZBIT), University of Tübingen, Tübingen 72070, Germany.
  • Nieselt K; Centre for Bioinformatics Tübingen (ZBIT), University of Tübingen, Tübingen 72070, Germany.
  • Krause J; Department of Archaeological Sciences, University of Tübingen, Tübingen 72070, Germany Senckenberg Centre for Human Evolution and Palaeoenvironment, University of Tübingen, Tübingen 72070, Germany Max Planck Institute for History and Sciences, Jena 07745, Germany.
Philos Trans R Soc Lond B Biol Sci ; 370(1660): 20130375, 2015 Jan 19.
Article en En | MEDLINE | ID: mdl-25487327
DNA capture coupled with next generation sequencing is highly suitable for the study of ancient pathogens. Screening for pathogens can, however, be meticulous when assays are restricted to the enrichment of single organisms, which is common practice. Here, we report on an array-based DNA capture screening technique for the parallel detection of nearly 100 pathogens that could have potentially left behind molecular signatures in preserved ancient tissues. We demonstrate the sensitivity of our method through evaluation of its performance with a library known to harbour ancient Mycobacterium leprae DNA. This rapid and economical technique will be highly useful for the identification of historical diseases that are difficult to characterize based on archaeological information alone.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Bacterias / ADN Bacteriano / Técnicas Genéticas / Secuenciación de Nucleótidos de Alto Rendimiento / Fósiles Tipo de estudio: Diagnostic_studies / Prognostic_studies Idioma: En Revista: Philos Trans R Soc Lond B Biol Sci Año: 2015 Tipo del documento: Article País de afiliación: Alemania Pais de publicación: Reino Unido

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Bacterias / ADN Bacteriano / Técnicas Genéticas / Secuenciación de Nucleótidos de Alto Rendimiento / Fósiles Tipo de estudio: Diagnostic_studies / Prognostic_studies Idioma: En Revista: Philos Trans R Soc Lond B Biol Sci Año: 2015 Tipo del documento: Article País de afiliación: Alemania Pais de publicación: Reino Unido