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Charge screening in RNA: an integral route for dynamical enhancements.
Roh, Joon Ho; Tyagi, Madhu; Aich, Pulakesh; Kim, Kimoon; Briber, R M; Woodson, Sarah A.
Afiliación
  • Roh JH; Center for Self-assembly and Complexity (CSC), Institute for Basic Science (IBS), Pohang 37673, South Korea. jhroh@ibs.re.kr and Biomolecular Science, University of Science and Technology, Daejeon 34113, South Korea.
  • Tyagi M; NIST Center for Neutron Research, National Institute of Standards and Techonology, Gaithersburg, Maryland 20899, USA and Department of Materials Science and Engineering, University of Maryland, College Park, Maryland 20742, USA.
  • Aich P; Center for Self-assembly and Complexity (CSC), Institute for Basic Science (IBS), Pohang 37673, South Korea. jhroh@ibs.re.kr.
  • Kim K; Center for Self-assembly and Complexity (CSC), Institute for Basic Science (IBS), Pohang 37673, South Korea. jhroh@ibs.re.kr and Department of Chemistry, Pohang University of Science and Technology, Pohang 37673, South Korea.
  • Briber RM; Department of Materials Science and Engineering, University of Maryland, College Park, Maryland 20742, USA.
  • Woodson SA; T. C. Jenkins Department of Biophysics, Johns Hopkins University, Baltimore, Maryland 21218, USA.
Soft Matter ; 11(45): 8741-5, 2015 Dec 07.
Article en En | MEDLINE | ID: mdl-26430908
ABSTRACT
Electrostatic interactions of RNA are at the center of determining the dynamical flexibility and structural stability. By analysing neutron scattering spectroscopy, we show that fast dynamics of hydrated tRNA on ps to ns timescales increases with stronger charge screening, while its structural stability either increases or remains largely unchanged. An unprecedented electrostatic threshold for the onset of additional flexibility is induced from the correlation between the charge-screening density of counterions and the promoted dynamical properties. The results demonstrate that the enhanced dynamical flexibility of tRNA originates from local conformational relaxation coupled with stabilized charge screening rather than governed by fluctuation of hydrated counterions. The present study casts light on the specificity of electrostatic interactions in the thermodynamic balance between the dynamical flexibility and structural stability of RNA.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: ARN de Transferencia / Electricidad Estática / Simulación de Dinámica Molecular Tipo de estudio: Diagnostic_studies / Screening_studies Idioma: En Revista: Soft Matter Año: 2015 Tipo del documento: Article País de afiliación: Corea del Sur

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: ARN de Transferencia / Electricidad Estática / Simulación de Dinámica Molecular Tipo de estudio: Diagnostic_studies / Screening_studies Idioma: En Revista: Soft Matter Año: 2015 Tipo del documento: Article País de afiliación: Corea del Sur