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[Construction and analysis of a breast cancer gene-drug network model].
Wei, Xing; Hu, De-Hua; Yi, Min-Han; Chang, Xue-Lian; Zhu, Wen-Jie; Qu, Shao-Ling; Deng, Duan-Ying.
Afiliación
  • Wei X; 1Instituteof Information Security and Big Data, 2School of Public Health,Central South University, Changsha 410083, China; 3Department of Public Courses, Bengbu Medical College, Bengbu 233003, China. E-mail: weixing911119@163.com.
Nan Fang Yi Ke Da Xue Xue Bao ; 36(2): 170-9, 2016 Feb.
Article en Zh | MEDLINE | ID: mdl-26922011
OBJECTIVE: To construct a breast cancer gene-drug network model for extracting and predicting the correlations between breast cancer-related genes and drugs. METHODS: We developed an algorithm based on the ABC principle and the association rules to obtain the correlations between the biological entities. For breast cancer, we constructed 3 different correlations (gene-gene, drug-drug and gene-drug) and used the R language to implement the associated network model. The reliability of the algorithm was verified by ROC curve. RESULTS: We identified 185 breast cancer-associated genes and 98 associations between them, 97 drugs and 170 associations between them. The breast cancer genes-drugs network contained 127 genes and 77 drugs with 384 associations between them. CONCLUSIONS: We identified a large number of different correlations between the breast cancer-related genes and drugs and close correlations between some biological entity pairs that have not yet been reported, which may provide a new strategy for experimental design for testing personalized breast cancer treatment.
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Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Neoplasias de la Mama / Genes Relacionados con las Neoplasias / Redes Reguladoras de Genes / Antineoplásicos Tipo de estudio: Prognostic_studies Límite: Female / Humans Idioma: Zh Revista: Nan Fang Yi Ke Da Xue Xue Bao Año: 2016 Tipo del documento: Article Pais de publicación: China
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Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Neoplasias de la Mama / Genes Relacionados con las Neoplasias / Redes Reguladoras de Genes / Antineoplásicos Tipo de estudio: Prognostic_studies Límite: Female / Humans Idioma: Zh Revista: Nan Fang Yi Ke Da Xue Xue Bao Año: 2016 Tipo del documento: Article Pais de publicación: China