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Crowds Replicate Performance of Scientific Experts Scoring Phylogenetic Matrices of Phenotypes.
O'Leary, Maureen A; Alphonse, Kenzley; Mariangeles, Arce H; Cavaliere, Dario; Cirranello, Andrea; Dietterich, Thomas G; Julius, Matthew; Kaufman, Seth; Law, Edith; Passarotti, Maria; Reft, Abigail; Robalino, Javier; Simmons, Nancy B; Smith, Selena Y; Stevenson, Dennis W; Theriot, Ed; Velazco, Paúl M; Walls, Ramona L; Yu, Mengjie; Daly, Marymegan.
Afiliación
  • O'Leary MA; Department of Anatomical Sciences, HSC T-8 (040), Stony Brook University, Stony Brook, NY 11794-8081, USA.
  • Alphonse K; Kenx Technology, Inc., 1170 N. Milwaukee Ave. Chicago, IL 60642, USA.
  • Mariangeles AH; Department of Anatomical Sciences, HSC T-8 (040), Stony Brook University, Stony Brook, NY 11794-8081, USA.
  • Cavaliere D; Department of Ichthyology, The Academy of Natural Sciences of Drexel University, 1900 Benjamin Franklin Parkway, Philadelphia PA 19103, USA.
  • Cirranello A; New York Botanical Garden, 2900 Southern Boulevard, Bronx, NY 10458-5126, USA.
  • Dietterich TG; Department of Mammalogy, American Museum of Natural History, 79th Street at Central Park West, New York, NY 10024-5192, USA.
  • Julius M; School of Electrical Engineering and Computer Science, 1148 Kelley Engineering Center, Oregon State University, Corvallis, OR 97331-5501, USA.
  • Kaufman S; Department of Biological Sciences, St. Cloud State University, WSB-225, 720 Fourth Avenue South, St. Cloud, MN 56301-4498, USA.
  • Law E; Whirl-i-gig, 109 South 5th Street, Suite 608, Brooklyn, NY 10012, USA.
  • Passarotti M; David R. Cheriton School of Computer Sciences, University of Waterloo, Waterloo, Ontario, Canada N2L 3G1.
  • Reft A; Whirl-i-gig, 109 South 5th Street, Suite 608, Brooklyn, NY 10012, USA.
  • Robalino J; Department of Evolution, Ecology and Organismal Biology, The Ohio State University, 43210, USA.
  • Simmons NB; Biology Department, College of William and Mary, Williamsburg, VA 23187, USA.
  • Smith SY; Department of Anatomical Sciences, HSC T-8 (040), Stony Brook University, Stony Brook, NY 11794-8081, USA.
  • Stevenson DW; Science Education Department, Howard Hughes Medical Institute, 4000 Jones Bridge Road, Chevy Chase, MD 20815, USA.
  • Theriot E; Department of Mammalogy, American Museum of Natural History, 79th Street at Central Park West, New York, NY 10024-5192, USA.
  • Velazco PM; Department of Earth & Environmental Sciences and Museum of Paleontology, University of Michigan, 2534 C.C. Little Building, 1100 North University Avenue, Ann Arbor, MI 48109, USA.
  • Walls RL; New York Botanical Garden, 2900 Southern Boulevard, Bronx, NY 10458-5126, USA.
  • Yu M; Department of Integrative Biology, University of Texas at Austin, 1 University Station #C0930, Austin, Texas, 78712, USA.
  • Daly M; Department of Vertebrate Paleontology, American Museum of Natural History, 79th Street at Central Park West, New York, NY 10024-5192, USA.
Syst Biol ; 67(1): 49-60, 2018 Jan 01.
Article en En | MEDLINE | ID: mdl-29253296
ABSTRACT
Scientists building the Tree of Life face an overwhelming challenge to categorize phenotypes (e.g., anatomy, physiology) from millions of living and fossil species. This biodiversity challenge far outstrips the capacities of trained scientific experts. Here we explore whether crowdsourcing can be used to collect matrix data on a large scale with the participation of nonexpert students, or "citizen scientists." Crowdsourcing, or data collection by nonexperts, frequently via the internet, has enabled scientists to tackle some large-scale data collection challenges too massive for individuals or scientific teams alone. The quality of work by nonexpert crowds is, however, often questioned and little data have been collected on how such crowds perform on complex tasks such as phylogenetic character coding. We studied a crowd of over 600 nonexperts and found that they could use images to identify anatomical similarity (hypotheses of homology) with an average accuracy of 82% compared with scores provided by experts in the field. This performance pattern held across the Tree of Life, from protists to vertebrates. We introduce a procedure that predicts the difficulty of each character and that can be used to assign harder characters to experts and easier characters to a nonexpert crowd for scoring. We test this procedure in a controlled experiment comparing crowd scores to those of experts and show that crowds can produce matrices with over 90% of cells scored correctly while reducing the number of cells to be scored by experts by 50%. Preparation time, including image collection and processing, for a crowdsourcing experiment is significant, and does not currently save time of scientific experts overall. However, if innovations in automation or robotics can reduce such effort, then large-scale implementation of our method could greatly increase the collective scientific knowledge of species phenotypes for phylogenetic tree building. For the field of crowdsourcing, we provide a rare study with ground truth, or an experimental control that many studies lack, and contribute new methods on how to coordinate the work of experts and nonexperts. We show that there are important instances in which crowd consensus is not a good proxy for correctness.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Filogenia / Clasificación / Colaboración de las Masas Tipo de estudio: Prognostic_studies Límite: Animals Idioma: En Revista: Syst Biol Asunto de la revista: BIOLOGIA Año: 2018 Tipo del documento: Article País de afiliación: Estados Unidos

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Filogenia / Clasificación / Colaboración de las Masas Tipo de estudio: Prognostic_studies Límite: Animals Idioma: En Revista: Syst Biol Asunto de la revista: BIOLOGIA Año: 2018 Tipo del documento: Article País de afiliación: Estados Unidos