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Structures of single-layer ß-sheet proteins evolved from ß-hairpin repeats.
Xu, Qingping; Biancalana, Matthew; Grant, Joanna C; Chiu, Hsiu-Ju; Jaroszewski, Lukasz; Knuth, Mark W; Lesley, Scott A; Godzik, Adam; Elsliger, Marc-André; Deacon, Ashley M; Wilson, Ian A.
Afiliación
  • Xu Q; Joint Center for Structural Genomics, www.jcsg.org.
  • Biancalana M; Stanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, Menlo Park, California.
  • Grant JC; GMCA@APS, Argonne National Laboratory, Lemont, Illinois.
  • Chiu HJ; Perlmutter Cancer Center, New York University Langone Medical Center, Smilow Research Center, New York, New York.
  • Jaroszewski L; Joint Center for Structural Genomics, www.jcsg.org.
  • Knuth MW; Joint Center for Structural Genomics, www.jcsg.org.
  • Lesley SA; Stanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, Menlo Park, California.
  • Godzik A; Joint Center for Structural Genomics, www.jcsg.org.
  • Elsliger MA; Center for Research in Biological Systems, University of California, La Jolla, California.
  • Deacon AM; Program on Bioinformatics and Systems Biology, Sanford-Burnham Medical Research Institute, La Jolla, California.
  • Wilson IA; Division of Biomedical Sciences, University of California, Riverside, California.
Protein Sci ; 28(9): 1676-1689, 2019 09.
Article en En | MEDLINE | ID: mdl-31306512
ABSTRACT
Free-standing single-layer ß-sheets are extremely rare in naturally occurring proteins, even though ß-sheet motifs are ubiquitous. Here we report the crystal structures of three homologous, single-layer, anti-parallel ß-sheet proteins, comprised of three or four twisted ß-hairpin repeats. The structures reveal that, in addition to the hydrogen bond network characteristic of ß-sheets, additional hydrophobic interactions mediated by small clusters of residues adjacent to the turns likely play a significant role in the structural stability and compensate for the lack of a compact hydrophobic core. These structures enabled identification of a family of secreted proteins that are broadly distributed in bacteria from the human gut microbiome and are putatively involved in the metabolism of complex carbohydrates. A conserved surface patch, rich in solvent-exposed tyrosine residues, was identified on the concave surface of the ß-sheet. These new modular single-layer ß-sheet proteins may serve as a new model system for studying folding and design of ß-rich proteins.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Bacterias / Proteínas Bacterianas Tipo de estudio: Prognostic_studies Idioma: En Revista: Protein Sci Asunto de la revista: BIOQUIMICA Año: 2019 Tipo del documento: Article

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Bacterias / Proteínas Bacterianas Tipo de estudio: Prognostic_studies Idioma: En Revista: Protein Sci Asunto de la revista: BIOQUIMICA Año: 2019 Tipo del documento: Article