Dataset for transcriptome analysis of abscisic acid degrading bacterium <i>Novosphingobium</i> sp. P6W.

Gogoleva, Natalia E; Konnova, Tatiana A; Ismailov, Timur T; Balkin, Alexander S; Belimov, Andrey A; Gogolev, Yuri V

Dataset for transcriptome analysis of abscisic acid degrading bacterium Novosphingobium sp. P6W.

Gogoleva, Natalia E; Konnova, Tatiana A; Ismailov, Timur T; Balkin, Alexander S; Belimov, Andrey A; Gogolev, Yuri V.

Afiliación

Gogoleva NE; Kazan Institute of Biochemistry and Biophysics, Kazan Scientific Center of RAS, 2/31 Lobachevsky St., Kazan 420111, Russian Federation.
Konnova TA; Institute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal University, 18 Lenina St., Kazan 420021, Russian Federation.
Ismailov TT; Kazan Institute of Biochemistry and Biophysics, Kazan Scientific Center of RAS, 2/31 Lobachevsky St., Kazan 420111, Russian Federation.
Balkin AS; Kazan Institute of Biochemistry and Biophysics, Kazan Scientific Center of RAS, 2/31 Lobachevsky St., Kazan 420111, Russian Federation.
Belimov AA; Center of Shared Scientific Equipment "Persistence of Microorganisms", Institute for Cellular and Intracellular Symbiosis, Ural Branch of Russian Academy of Sciences, Orenburg, Russian Federation.
Gogolev YV; All-Russia Research Institute for Agricultural Microbiology, 3 Sh. Podbelskogo St., Saint Petersburg 196608, Russian Federation.

Data Brief ; 28: 105001, 2020 Feb.

Article en En | MEDLINE | ID: mdl-31909107

ABSTRACT

ABSTRACT

Plant growth-promoting rhizobacteria (PGPR) improve plant productivity and stress resistance. The mechanisms involved in plant-microbe interactions include the modulation of plant hormone status. The Novosphingobium sp. strain P6W was previously described as the bacterium capable of abscisic acid (ABA) degradation, and its inoculation decreased ABA concentrations in planta. The metabolic pathway for the ABA degradation in bacteria is still unknown. Here we present transcriptome data of Novosphingobium sp. P6W grown in the medium supplemented with ABA or fructose as the carbon source. Cleaned FASTQ files for the RNA-seq libraries are deposited in the NCBI Sequence Read Archive (SRA, Identifier SRP189498) and have been assigned BioProject accession PRJNA529223.

Palabras clave

Illumina; Novosphingobium sp.; Plant growth-promoting rhizobacteria (PGPR); RNA-seq; Rhizosphere

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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Idioma: En Revista: Data Brief Año: 2020 Tipo del documento: Article