AmpliconReconstructor integrates NGS and optical mapping to resolve the complex structures of focal amplifications.

Luebeck, Jens; Coruh, Ceyda; Dehkordi, Siavash R; Lange, Joshua T; Turner, Kristen M; Deshpande, Viraj; Pai, Dave A; Zhang, Chao; Rajkumar, Utkrisht; Law, Julie A; Mischel, Paul S; Bafna, Vineet

Luebeck, Jens; Coruh, Ceyda; Dehkordi, Siavash R; Lange, Joshua T; Turner, Kristen M; Deshpande, Viraj; Pai, Dave A; Zhang, Chao; Rajkumar, Utkrisht; Law, Julie A; Mischel, Paul S; Bafna, Vineet.

Afiliación

Luebeck J; Bioinformatics and Systems Biology Graduate Program, University of California at San Diego, La Jolla, CA, 92093, USA.
Coruh C; Department of Computer Science and Engineering, University of California at San Diego, La Jolla, CA, 92093, USA.
Dehkordi SR; Plant Molecular and Cellular Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA, 92037, USA.
Lange JT; Department of Computer Science and Engineering, University of California at San Diego, La Jolla, CA, 92093, USA.
Turner KM; Biomedical Sciences Graduate Program, University of California at San Diego, La Jolla, CA, 92093, USA.
Deshpande V; Ludwig Institute for Cancer Research, University of California at San Diego, La Jolla, CA, 92093, USA.
Pai DA; Ludwig Institute for Cancer Research, University of California at San Diego, La Jolla, CA, 92093, USA.
Zhang C; Department of Computer Science and Engineering, University of California at San Diego, La Jolla, CA, 92093, USA.
Rajkumar U; Bionano Genomics, Inc., San Diego, CA, 92121, USA.
Law JA; Bioinformatics and Systems Biology Graduate Program, University of California at San Diego, La Jolla, CA, 92093, USA.
Mischel PS; Department of Computer Science and Engineering, University of California at San Diego, La Jolla, CA, 92093, USA.
Bafna V; Plant Molecular and Cellular Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA, 92037, USA.

Nat Commun ; 11(1): 4374, 2020 09 01.

Article en En | MEDLINE | ID: mdl-32873787

Asunto(s)

Amplificación de Genes; Genómica/métodos; Neoplasias/genética; Oncogenes/genética; Línea Celular Tumoral; Mapeo Cromosómico/métodos; Análisis Citogenético; Genoma Humano/genética; Secuenciación de Nucleótidos de Alto Rendimiento/métodos; Humanos

Texto completo

Añadir a Mi BVS

Imprimir

XML

PubMed Links

Buscar en Google

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Oncogenes / Amplificación de Genes / Genómica / Neoplasias Límite: Humans Idioma: En Revista: Nat Commun Asunto de la revista: BIOLOGIA / CIENCIA Año: 2020 Tipo del documento: Article País de afiliación: Estados Unidos Pais de publicación: Reino Unido

Texto completo

Añadir a Mi BVS

Imprimir

XML

PubMed Links

Buscar en Google