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Quantifying Drosophila adults with the use of a smartphone.
Karpova, Evgenia K; Komyshev, Evgenii G; Genaev, Mikhail A; Adonyeva, Natalya V; Afonnikov, Dmitry A; Eremina, Margarita A; Gruntenko, Nataly E.
Afiliación
  • Karpova EK; Laboratory of Stress Genetics, Institute of Cytology and Genetics SB RAS, Novosibirsk 630090, Russia.
  • Komyshev EG; Laboratory of Stress Genetics, Institute of Cytology and Genetics SB RAS, Novosibirsk 630090, Russia.
  • Genaev MA; Laboratory of Stress Genetics, Institute of Cytology and Genetics SB RAS, Novosibirsk 630090, Russia.
  • Adonyeva NV; Laboratory of Evolutionary Bioinformatics and Theoretical Genetics, Department of Natural Sciences, Novosibirsk State University, 630090, Novosibirsk, Russia.
  • Afonnikov DA; Laboratory of Stress Genetics, Institute of Cytology and Genetics SB RAS, Novosibirsk 630090, Russia.
  • Eremina MA; Laboratory of Stress Genetics, Institute of Cytology and Genetics SB RAS, Novosibirsk 630090, Russia.
  • Gruntenko NE; Laboratory of Stress Genetics, Institute of Cytology and Genetics SB RAS, Novosibirsk 630090, Russia.
Biol Open ; 9(10)2020 10 08.
Article en En | MEDLINE | ID: mdl-32917765
ABSTRACT
A method for automation of imago quantifying and fecundity assessment in Drosophila with the use of mobile devices running Android operating system is proposed. The traditional manual method of counting the progeny takes a long time and limits the opportunity of making large-scale experiments. Thus, the development of computerized methods that would allow us to automatically make a quantitative estimate of Drosophilamelanogaster fecundity is an urgent requirement. We offer a modification of the mobile application SeedCounter that analyzes images of objects placed on a standard sheet of paper for an automatic calculation of D. melanogaster offspring or quantification of adult flies in any other kind of experiment. The relative average error in estimates of the number of flies by mobile app is about 2% in comparison with the manual counting and the processing time is six times shorter. Study of the effects of imaging conditions on accuracy of flies counting showed that lighting conditions do not significantly affect this parameter, and higher accuracy can be achieved using high-resolution smartphone cameras (8 Mpx and more). These results indicate the high accuracy and efficiency of the method suggested.This article has an associated First Person interview with the first author of the paper.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Reproducción / Drosophila / Fertilidad / Teléfono Inteligente Límite: Animals Idioma: En Revista: Biol Open Año: 2020 Tipo del documento: Article País de afiliación: Rusia

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Reproducción / Drosophila / Fertilidad / Teléfono Inteligente Límite: Animals Idioma: En Revista: Biol Open Año: 2020 Tipo del documento: Article País de afiliación: Rusia