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Complete genome sequence of Sikte (Sitke) waterborne virus, a member of the genus Tombusvirus.
Uehara-Ichiki, Tamaki; Urayama, Syun-Ichi; Hirai, Miho; Takaki, Yoshihiro; Nunoura, Takuro; Fujinaga, Masashi; Hanada, Kaoru.
Afiliación
  • Uehara-Ichiki T; Genetic Resources Center, National Agriculture and Food Research Organization, 2-1-2 Kan-nondai, Tsukuba, Ibaraki, 305-8602, Japan. tuehara@affrc.go.jp.
  • Urayama SI; Laboratory of Fungal Interaction and Molecular Biology, Department of Life and Environmental Sciences, University of Tsukuba, 1-1-1 Ten-no-dai, Tsukuba, Ibaraki, 305-8577, Japan.
  • Hirai M; Super-cutting-edge Grand and Advanced Research (SUGAR) Program, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), 2-15 Natsushima-cho, Yokosuka, Kanagawa, 237-0061, Japan.
  • Takaki Y; Super-cutting-edge Grand and Advanced Research (SUGAR) Program, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), 2-15 Natsushima-cho, Yokosuka, Kanagawa, 237-0061, Japan.
  • Nunoura T; Research Center for Bioscience and Nanoscience (CeBN), Japan Agency for Marine-Earth Science and Technology (JAMSTEC), 2-15 Natsushima-cho, Yokosuka, Kanagawa, 237-0061, Japan.
  • Fujinaga M; Nagano Vegetable and Ornamental Crops Experiment Station, So-ga Tokoo Shiojiri, Nagano, 399-6461, Japan.
  • Hanada K; Genetic Resources Center, National Agriculture and Food Research Organization, 2-1-2 Kan-nondai, Tsukuba, Ibaraki, 305-8602, Japan.
Arch Virol ; 166(3): 991-994, 2021 Mar.
Article en En | MEDLINE | ID: mdl-33492526
ABSTRACT
The 4704-nt genome sequence of Sikte waterborne virus (SWV), determined by fragmented and primer ligated dsRNA sequencing and by direct Sanger sequencing, is linear, nonsegmented and has the five ORFs of other tombusviruses. The 5' and 3' untranslated regions (UTRs) are 150 and 335 nt long, respectively. Phylogenetic analysis of the coat protein revealed that SWV is related to CymRSV and PNSV, but that of the SWV replicase protein, the p92 readthrough protein, indicated a close relationship to CNV. These phylogenetic analyses suggest the occurrence of recombination events in SWV, as reported previously for other tombusviruses.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: ARN Viral / Genoma Viral / Tombusvirus / Chenopodium quinoa País/Región como asunto: Europa Idioma: En Revista: Arch Virol Año: 2021 Tipo del documento: Article País de afiliación: Japón
Texto completo
Añadir a Mi BVS
Imprimir
XML
PubMed Links
Buscar en Google

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: ARN Viral / Genoma Viral / Tombusvirus / Chenopodium quinoa País/Región como asunto: Europa Idioma: En Revista: Arch Virol Año: 2021 Tipo del documento: Article País de afiliación: Japón