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Core Imaging Library - Part I: a versatile Python framework for tomographic imaging.
Jørgensen, J S; Ametova, E; Burca, G; Fardell, G; Papoutsellis, E; Pasca, E; Thielemans, K; Turner, M; Warr, R; Lionheart, W R B; Withers, P J.
Afiliación
  • Jørgensen JS; Department of Applied Mathematics and Computer Science, Technical University of Denmark, Kongens Lyngby, Denmark.
  • Ametova E; Department of Mathematics, The University of Manchester, Manchester, UK.
  • Burca G; Laboratory for Applications of Synchrotron Radiation, Karlsruhe Institute of Technology, Karlsruhe, Germany.
  • Fardell G; Henry Royce Institute, Department of Materials, The University of Manchester, Manchester, UK.
  • Papoutsellis E; ISIS Neutron and Muon Source, STFC, UKRI, Rutherford Appleton Laboratory, Didcot, UK.
  • Pasca E; Department of Mathematics, The University of Manchester, Manchester, UK.
  • Thielemans K; Scientific Computing Department, STFC, UKRI, Rutherford Appleton Laboratory, Didcot, UK.
  • Turner M; Scientific Computing Department, STFC, UKRI, Rutherford Appleton Laboratory, Didcot, UK.
  • Warr R; Henry Royce Institute, Department of Materials, The University of Manchester, Manchester, UK.
  • Lionheart WRB; Scientific Computing Department, STFC, UKRI, Rutherford Appleton Laboratory, Didcot, UK.
  • Withers PJ; Institute of Nuclear Medicine and Centre for Medical Image Computing, University College London, London, UK.
Philos Trans A Math Phys Eng Sci ; 379(2204): 20200192, 2021 Aug 23.
Article en En | MEDLINE | ID: mdl-34218673
ABSTRACT
We present the Core Imaging Library (CIL), an open-source Python framework for tomographic imaging with particular emphasis on reconstruction of challenging datasets. Conventional filtered back-projection reconstruction tends to be insufficient for highly noisy, incomplete, non-standard or multi-channel data arising for example in dynamic, spectral and in situ tomography. CIL provides an extensive modular optimization framework for prototyping reconstruction methods including sparsity and total variation regularization, as well as tools for loading, preprocessing and visualizing tomographic data. The capabilities of CIL are demonstrated on a synchrotron example dataset and three challenging cases spanning golden-ratio neutron tomography, cone-beam X-ray laminography and positron emission tomography. This article is part of the theme issue 'Synergistic tomographic image reconstruction part 2'.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Programas Informáticos / Interpretación de Imagen Radiográfica Asistida por Computador / Tomografía Computarizada por Rayos X Límite: Humans Idioma: En Revista: Philos Trans A Math Phys Eng Sci Asunto de la revista: BIOFISICA / ENGENHARIA BIOMEDICA Año: 2021 Tipo del documento: Article País de afiliación: Dinamarca

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Programas Informáticos / Interpretación de Imagen Radiográfica Asistida por Computador / Tomografía Computarizada por Rayos X Límite: Humans Idioma: En Revista: Philos Trans A Math Phys Eng Sci Asunto de la revista: BIOFISICA / ENGENHARIA BIOMEDICA Año: 2021 Tipo del documento: Article País de afiliación: Dinamarca