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Encapsulation of Aromatic Guests in the Bisporphyrin Cavity of a Double-Stranded Spiroborate Helicate: Thermodynamic and Kinetic Studies and the Encapsulation Mechanism.
Ousaka, Naoki; Yamamoto, Shinya; Iida, Hiroki; Iwata, Takuya; Ito, Shingo; Souza, Rafael; Hijikata, Yuh; Irle, Stephan; Yashima, Eiji.
Afiliación
  • Ousaka N; Department of Molecular Design and Engineering, Graduate School of Engineering, Nagoya University, Nagoya 464-8603, Japan.
  • Yamamoto S; Department of Molecular and Macromolecular Chemistry, Graduate School of Engineering, Nagoya University, Nagoya 464-8603, Japan.
  • Iida H; Department of Molecular Design and Engineering, Graduate School of Engineering, Nagoya University, Nagoya 464-8603, Japan.
  • Iwata T; Department of Molecular Design and Engineering, Graduate School of Engineering, Nagoya University, Nagoya 464-8603, Japan.
  • Ito S; Department of Molecular Design and Engineering, Graduate School of Engineering, Nagoya University, Nagoya 464-8603, Japan.
  • Souza R; Department of Chemistry, Graduate School of Science, Nagoya University, Nagoya 464-8602, Japan.
  • Hijikata Y; Department of Chemistry, Graduate School of Science, Nagoya University, Nagoya 464-8602, Japan.
  • Irle S; Department of Chemistry, Graduate School of Science, Nagoya University, Nagoya 464-8602, Japan.
  • Yashima E; Institute of Transformative Bio-Molecules (WPI-ITbM), Nagoya University, Nagoya 464-8601, Japan.
J Org Chem ; 86(15): 10501-10516, 2021 08 06.
Article en En | MEDLINE | ID: mdl-34282918
ABSTRACT
A double-stranded spiroborate helicate bearing a bisporphyrin unit in the middle forms an inclusion complex with electron-deficient aromatic guests that are sandwiched between the porphyrins. In the present study, we systematically investigated the effects of size, electron density, and substituents of a series of aromatic guests on inclusion complex formations within the bisporphyrin. The thermodynamic and kinetic behaviors during the guest-encapsulation process were also investigated in detail. The guest-encapsulation abilities in the helicate increased with the increasing core sizes of the electron-deficient aromatic guests and decreased with the increasing bulkiness and number of substituents of the guests. Among the naphthalenediimide derivatives, those with bulky N-substituents at both ends hardly formed an inclusion complex. Instead, they formed a [2]rotaxane-like inclusion complex through the water-mediated dynamic B-O bond cleavage/reformation of the spiroborate groups of the helicate, which enhanced the conformational flexibility of the helicate to enlarge the bisporphyrin cavity and form an inclusion complex. Based on the X-ray crystal structure of a unique pacman-like 11 inclusion complex between the helicate and an ammonium cation as well as the molecular dynamics simulation results, a plausible mechanism for the inclusion of a planar aromatic guest within the helicate is also proposed.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Electrones / Simulación de Dinámica Molecular Idioma: En Revista: J Org Chem Año: 2021 Tipo del documento: Article País de afiliación: Japón Pais de publicación: EEUU / ESTADOS UNIDOS / ESTADOS UNIDOS DA AMERICA / EUA / UNITED STATES / UNITED STATES OF AMERICA / US / USA

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Electrones / Simulación de Dinámica Molecular Idioma: En Revista: J Org Chem Año: 2021 Tipo del documento: Article País de afiliación: Japón Pais de publicación: EEUU / ESTADOS UNIDOS / ESTADOS UNIDOS DA AMERICA / EUA / UNITED STATES / UNITED STATES OF AMERICA / US / USA