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A Carbon Nanotube Sensor Array for the Label-Free Discrimination of Live and Dead Cells with Machine Learning.
Liu, Zhengru; Shurin, Galina V; Bian, Long; White, David L; Shurin, Michael R; Star, Alexander.
Afiliación
  • Liu Z; Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States.
  • Shurin GV; Department of Pathology, University of Pittsburgh Medical Center, 3550 Terrace Street, Pittsburgh, Pennsylvania 15261, United States.
  • Bian L; Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States.
  • White DL; Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States.
  • Shurin MR; Department of Pathology, University of Pittsburgh Medical Center, 3550 Terrace Street, Pittsburgh, Pennsylvania 15261, United States.
  • Star A; Department of Immunology, University of Pittsburgh Medical Center, Pittsburgh, Pennsylvania 15213, United States.
Anal Chem ; 94(8): 3565-3573, 2022 03 01.
Article en En | MEDLINE | ID: mdl-35166531
Developing robust cell recognition strategies is important in biochemical research, but the lack of well-defined target molecules creates a bottleneck in some applications. In this paper, a carbon nanotube sensor array was constructed for the label-free discrimination of live and dead mammalian cells. Three types of carbon nanotube field-effect transistors were fabricated, and different features were extracted from the transfer characteristic curves for model training with linear discriminant analysis (LDA) and support-vector machines (SVM). Live and dead cells were accurately classified in more than 90% of samples in each sensor group using LDA as the algorithm. The recursive feature elimination with cross-validation (RFECV) method was applied to handle the overfitting and optimize the model, and cells could be successfully classified with as few as four features and a higher validation accuracy (up to 97.9%) after model optimization. The RFECV method also revealed the crucial features in the classification, indicating the participation of different sensing mechanisms in the classification. Finally, the optimized LDA model was applied for the prediction of unknown samples with an accuracy of 87.5-93.8%, indicating that live and dead cell samples could be well-recognized with the constructed model.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Nanotubos de Carbono Tipo de estudio: Prognostic_studies Límite: Animals Idioma: En Revista: Anal Chem Año: 2022 Tipo del documento: Article País de afiliación: Estados Unidos Pais de publicación: Estados Unidos

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Nanotubos de Carbono Tipo de estudio: Prognostic_studies Límite: Animals Idioma: En Revista: Anal Chem Año: 2022 Tipo del documento: Article País de afiliación: Estados Unidos Pais de publicación: Estados Unidos