Your browser doesn't support javascript.
loading
Regulatory patterns analysis of transcription factor binding site clustered regions and identification of key genes in endometrial cancer.
Tang, Xiaohan; Wang, Junting; Tao, Huan; Yuan, Lin; Du, Guifang; Ding, Yang; Xu, Kang; Bai, Xuemei; Li, Yaru; Sun, Yu; Huang, Xin; Zheng, Xiushuang; Li, Qianqian; Gong, Bowen; Zheng, Yang; Xu, Jingxuan; Xu, Xiang; Wang, Zhe; Bo, Xiaochen; Lu, Meisong; Li, Hao; Chen, Hebing.
Afiliación
  • Tang X; The First Affiliated Hospital of Harbin Medical University, Harbin 150001, China.
  • Wang J; The First Affiliated Hospital of Harbin Medical University, Harbin 150001, China.
  • Tao H; Beijing Institute of Radiation Medicine, Beijing 100850, China.
  • Yuan L; Beijing Institute of Radiation Medicine, Beijing 100850, China.
  • Du G; Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
  • Ding Y; Beijing Institute of Radiation Medicine, Beijing 100850, China.
  • Xu K; Beijing Institute of Radiation Medicine, Beijing 100850, China.
  • Bai X; Beijing Institute of Radiation Medicine, Beijing 100850, China.
  • Li Y; The First Affiliated Hospital of Harbin Medical University, Harbin 150001, China.
  • Sun Y; Beijing Institute of Radiation Medicine, Beijing 100850, China.
  • Huang X; Beijing Institute of Radiation Medicine, Beijing 100850, China.
  • Zheng X; Beijing Institute of Radiation Medicine, Beijing 100850, China.
  • Li Q; The First Affiliated Hospital of Harbin Medical University, Harbin 150001, China.
  • Gong B; The First Affiliated Hospital of Harbin Medical University, Harbin 150001, China.
  • Zheng Y; The First Affiliated Hospital of Harbin Medical University, Harbin 150001, China.
  • Xu J; Beijing Institute of Radiation Medicine, Beijing 100850, China.
  • Xu X; Beijing Institute of Radiation Medicine, Beijing 100850, China.
  • Wang Z; Beijing Institute of Radiation Medicine, Beijing 100850, China.
  • Bo X; Beijing Institute of Radiation Medicine, Beijing 100850, China.
  • Lu M; Beijing Institute of Radiation Medicine, Beijing 100850, China.
  • Li H; The First Affiliated Hospital of Harbin Medical University, Harbin 150001, China.
  • Chen H; Beijing Institute of Radiation Medicine, Beijing 100850, China.
Comput Struct Biotechnol J ; 20: 812-823, 2022.
Article en En | MEDLINE | ID: mdl-35222842
Endometrial cancer (EC) is one of the three fatal tumors of the female reproductive system. Epigenetic alterations have been reported to be important in tumorigenesis, especially the chromatin accessibility changes and transcription factor binding differences. However, the regulatory mechanism underlying epigenetic alterations in EC development remains unclear. Here, we identified and characterized transcription factor binding site clustered regions (TFCRs) by integrating chromatin accessibility and transcription factor binding information. We totally identified 78,820 TFCRs and explored the relationship between TFCRs and regulatory elements, gene expression and mutation. Finally, we constructed a bioinformatic framework to identify candidate oncogenes and screened 13 candidate key genes, which may serve as potential diagnostic markers or therapeutic targets of EC.
Palabras clave

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Tipo de estudio: Diagnostic_studies / Prognostic_studies Idioma: En Revista: Comput Struct Biotechnol J Año: 2022 Tipo del documento: Article País de afiliación: China Pais de publicación: Países Bajos

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Tipo de estudio: Diagnostic_studies / Prognostic_studies Idioma: En Revista: Comput Struct Biotechnol J Año: 2022 Tipo del documento: Article País de afiliación: China Pais de publicación: Países Bajos