More Insights from Ultrastructural and Functional Plasmodesmata Data Using PDinsight.
Methods Mol Biol
; 2457: 443-456, 2022.
Article
en En
| MEDLINE
| ID: mdl-35349159
ABSTRACT
PDinsight is a Python-based tool for computing effective wall permeability for symplasmic transport based on plasmodesma (PD) size and distribution data. PDinsight can be used for direct computation of such permeabilities if full data is available, as well as in an explorative way if some data is either not available or considered unreliable. In this chapter, we briefly describe the basic model underlying the PDinsight calculations and discuss how the different modes of PDinsight can be used in relation to typical research questions. We also offer advice on choosing appropriate values for diffusion coefficients and particle size based on the currently most used experimental probes.
Palabras clave
Texto completo:
1
Colección:
01-internacional
Base de datos:
MEDLINE
Asunto principal:
Plasmodesmos
Tipo de estudio:
Prognostic_studies
Idioma:
En
Revista:
Methods Mol Biol
Asunto de la revista:
BIOLOGIA MOLECULAR
Año:
2022
Tipo del documento:
Article
País de afiliación:
Países Bajos