A novel 7hypoxiarelated long noncoding RNA signature associated with prognosis and proliferation in melanoma.
Mol Med Rep
; 26(2)2022 Aug.
Article
en En
| MEDLINE
| ID: mdl-35703357
Hypoxiarelated long noncoding RNAs (lncRNAs) are important indicators of the poor prognosis of cancers. The present study aimed to explore the potential relationship between melanoma and hypoxiarelated lncRNAs. The transcriptome and clinical data of patients with melanoma were downloaded from The Cancer Genome Atlas database. The prognostic hypoxiarelated lncRNAs were screened out using Pearson's correlation test and univariate Cox analysis. As a result, a hypoxiarelatedlncRNA signature based on the expression of 7 lncRNAs was constructed, with one unfavourable [MIR205 host gene (MIR205HG)] and six favourable (T cell receptor ß variable 112, HLADQB1 antisense RNA 1, AL365361.1, AC004847.1, ubiquitin specific peptidase 30 antisense RNA 1 and AC022706.1) lncRNAs as prognostic factors for melanoma. Patients with melanoma were divided into high and lowrisk groups based on the risk score obtained. Survival analyses were performed to assess the prognostic value of the present risk model. Potential tumourassociated biological pathways associated with the present signature were explored using gene set enrichment analysis. The CIBERSORT algorithm demonstrated the important role of the hypoxiarelated lncRNAs in regulating tumourinfiltrating immune cells. Clinical samples collected from our center partly confirmed our findings. Cell Counting Kit8 and flow cytometry assays indicated the suppression of proliferation of melanoma cells following inhibition of MIR205HG expression. Indicators of the canonical Wnt/ßcatenin signalling pathway were detected by western blotting. The present study demonstrated that MIR205HG could promote melanoma cell proliferation partly via the canonical Wnt/ßcatenin signalling pathway. These findings indicated a 7hypoxiarelatedlncRNA signature that can serve as a novel predictor of melanoma prognosis.
Palabras clave
Texto completo:
1
Colección:
01-internacional
Base de datos:
MEDLINE
Asunto principal:
MicroARNs
/
ARN Largo no Codificante
/
Melanoma
Tipo de estudio:
Prognostic_studies
/
Risk_factors_studies
Límite:
Humans
Idioma:
En
Revista:
Mol Med Rep
Año:
2022
Tipo del documento:
Article
Pais de publicación:
Grecia