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A large-scale neural network training framework for generalized estimation of single-trial population dynamics.
Keshtkaran, Mohammad Reza; Sedler, Andrew R; Chowdhury, Raeed H; Tandon, Raghav; Basrai, Diya; Nguyen, Sarah L; Sohn, Hansem; Jazayeri, Mehrdad; Miller, Lee E; Pandarinath, Chethan.
Afiliación
  • Keshtkaran MR; Wallace H. Coulter Department of Biomedical Engineering, Emory University and Georgia Institute of Technology, Atlanta, GA, USA.
  • Sedler AR; Wallace H. Coulter Department of Biomedical Engineering, Emory University and Georgia Institute of Technology, Atlanta, GA, USA.
  • Chowdhury RH; Center for Machine Learning, Georgia Institute of Technology, Atlanta, GA, USA.
  • Tandon R; Department of Biomedical Engineering, Northwestern University, Evanston, IL, USA.
  • Basrai D; Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA, USA.
  • Nguyen SL; Wallace H. Coulter Department of Biomedical Engineering, Emory University and Georgia Institute of Technology, Atlanta, GA, USA.
  • Sohn H; Center for Machine Learning, Georgia Institute of Technology, Atlanta, GA, USA.
  • Jazayeri M; Wallace H. Coulter Department of Biomedical Engineering, Emory University and Georgia Institute of Technology, Atlanta, GA, USA.
  • Miller LE; Physiology and Neuroscience, University of California, San Diego, La Jolla, CA, USA.
  • Pandarinath C; College of Computing, Georgia Institute of Technology, Atlanta, GA, USA.
Nat Methods ; 19(12): 1572-1577, 2022 12.
Article en En | MEDLINE | ID: mdl-36443486
ABSTRACT
Achieving state-of-the-art performance with deep neural population dynamics models requires extensive hyperparameter tuning for each dataset. AutoLFADS is a model-tuning framework that automatically produces high-performing autoencoding models on data from a variety of brain areas and tasks, without behavioral or task information. We demonstrate its broad applicability on several rhesus macaque datasets from motor cortex during free-paced reaching, somatosensory cortex during reaching with perturbations, and dorsomedial frontal cortex during a cognitive timing task.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Redes Neurales de la Computación / Corteza Motora Límite: Animals Idioma: En Revista: Nat Methods Asunto de la revista: TECNICAS E PROCEDIMENTOS DE LABORATORIO Año: 2022 Tipo del documento: Article País de afiliación: Estados Unidos

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Redes Neurales de la Computación / Corteza Motora Límite: Animals Idioma: En Revista: Nat Methods Asunto de la revista: TECNICAS E PROCEDIMENTOS DE LABORATORIO Año: 2022 Tipo del documento: Article País de afiliación: Estados Unidos