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MSCDA: Multi-level semantic-guided contrast improves unsupervised domain adaptation for breast MRI segmentation in small datasets.
Kuang, Sheng; Woodruff, Henry C; Granzier, Renee; van Nijnatten, Thiemo J A; Lobbes, Marc B I; Smidt, Marjolein L; Lambin, Philippe; Mehrkanoon, Siamak.
Afiliación
  • Kuang S; The D-Lab, Department of Precision Medicine, GROW - School or Oncology and Reproduction, Maastricht University, Maastricht, The Netherlands.
  • Woodruff HC; The D-Lab, Department of Precision Medicine, GROW - School or Oncology and Reproduction, Maastricht University, Maastricht, The Netherlands; Department of Radiology and Nuclear Medicine, Maastricht University Medical Centre+, Maastricht, The Netherlands.
  • Granzier R; Department of Surgery, Maastricht University Medical Centre+, Maastricht, The Netherlands.
  • van Nijnatten TJA; Department of Radiology and Nuclear Medicine, Maastricht University Medical Centre+, Maastricht, The Netherlands; GROW - School for Oncology and Reproduction, Maastricht University, Maastricht, The Netherlands.
  • Lobbes MBI; Department of Radiology and Nuclear Medicine, Maastricht University Medical Centre+, Maastricht, The Netherlands; GROW - School for Oncology and Reproduction, Maastricht University, Maastricht, The Netherlands; Department of Medical Imaging, Zuyderland Medical Center, Sittard-Geleen, The Netherlands
  • Smidt ML; Department of Surgery, Maastricht University Medical Centre+, Maastricht, The Netherlands; GROW - School for Oncology and Reproduction, Maastricht University, Maastricht, The Netherlands.
  • Lambin P; The D-Lab, Department of Precision Medicine, GROW - School or Oncology and Reproduction, Maastricht University, Maastricht, The Netherlands; Department of Radiology and Nuclear Medicine, Maastricht University Medical Centre+, Maastricht, The Netherlands.
  • Mehrkanoon S; Department of Information and Computing Sciences, Utrecht University, Utrecht, The Netherlands. Electronic address: s.mehrkanoon@uu.nl.
Neural Netw ; 165: 119-134, 2023 Aug.
Article en En | MEDLINE | ID: mdl-37285729
ABSTRACT
Deep learning (DL) applied to breast tissue segmentation in magnetic resonance imaging (MRI) has received increased attention in the last decade, however, the domain shift which arises from different vendors, acquisition protocols, and biological heterogeneity, remains an important but challenging obstacle on the path towards clinical implementation. In this paper, we propose a novel Multi-level Semantic-guided Contrastive Domain Adaptation (MSCDA) framework to address this issue in an unsupervised manner. Our approach incorporates self-training with contrastive learning to align feature representations between domains. In particular, we extend the contrastive loss by incorporating pixel-to-pixel, pixel-to-centroid, and centroid-to-centroid contrasts to better exploit the underlying semantic information of the image at different levels. To resolve the data imbalance problem, we utilize a category-wise cross-domain sampling strategy to sample anchors from target images and build a hybrid memory bank to store samples from source images. We have validated MSCDA with a challenging task of cross-domain breast MRI segmentation between datasets of healthy volunteers and invasive breast cancer patients. Extensive experiments show that MSCDA effectively improves the model's feature alignment capabilities between domains, outperforming state-of-the-art methods. Furthermore, the framework is shown to be label-efficient, achieving good performance with a smaller source dataset. The code is publicly available at https//github.com/ShengKuangCN/MSCDA.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Semántica / Neoplasias de la Mama Tipo de estudio: Guideline Límite: Female / Humans Idioma: En Revista: Neural Netw Asunto de la revista: NEUROLOGIA Año: 2023 Tipo del documento: Article País de afiliación: Países Bajos

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Semántica / Neoplasias de la Mama Tipo de estudio: Guideline Límite: Female / Humans Idioma: En Revista: Neural Netw Asunto de la revista: NEUROLOGIA Año: 2023 Tipo del documento: Article País de afiliación: Países Bajos