dadi-cli: Automated and distributed population genetic model inference from allele frequency spectra.
bioRxiv
; 2023 Jun 16.
Article
en En
| MEDLINE
| ID: mdl-37398279
ABSTRACT
Summary:
dadi is a popular software package for inferring models of demographic history and natural selection from population genomic data. But using dadi requires Python scripting and manual parallelization of optimization jobs. We developed dadi-cli to simplify dadi usage and also enable straighforward distributed computing. Availability and Implementation dadi-cli is implemented in Python and released under the Apache License 2.0. The source code is available at https//github.com/xin-huang/dadi-cli . dadi-cli can be installed via PyPI and conda, and is also available through Cacao on Jetstream2 https//cacao.jetstream-cloud.org/ .
Texto completo:
1
Colección:
01-internacional
Base de datos:
MEDLINE
Tipo de estudio:
Prognostic_studies
Idioma:
En
Revista:
BioRxiv
Año:
2023
Tipo del documento:
Article