A Comparison of Neuroelectrophysiology Databases.

Subash, Priyanka; Gray, Alex; Boswell, Misque; Cohen, Samantha L; Garner, Rachael; Salehi, Sana; Fisher, Calvary; Hobel, Samuel; Ghosh, Satrajit; Halchenko, Yaroslav; Dichter, Benjamin; Poldrack, Russell A; Markiewicz, Chris; Hermes, Dora; Delorme, Arnaud; Makeig, Scott; Behan, Brendan; Sparks, Alana; Arnott, Stephen R; Wang, Zhengjia; Magnotti, John; Beauchamp, Michael S; Pouratian, Nader; Toga, Arthur W; Duncan, Dominique

Subash, Priyanka; Gray, Alex; Boswell, Misque; Cohen, Samantha L; Garner, Rachael; Salehi, Sana; Fisher, Calvary; Hobel, Samuel; Ghosh, Satrajit; Halchenko, Yaroslav; Dichter, Benjamin; Poldrack, Russell A; Markiewicz, Chris; Hermes, Dora; Delorme, Arnaud; Makeig, Scott; Behan, Brendan; Sparks, Alana; Arnott, Stephen R; Wang, Zhengjia; Magnotti, John; Beauchamp, Michael S; Pouratian, Nader; Toga, Arthur W; Duncan, Dominique.

Afiliación

Subash P; Laboratory of Neuro Imaging, USC Stevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, 2025 Zonal Avenue, Los Angeles CA 90033.
Gray A; Laboratory of Neuro Imaging, USC Stevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, 2025 Zonal Avenue, Los Angeles CA 90033.
Boswell M; Laboratory of Neuro Imaging, USC Stevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, 2025 Zonal Avenue, Los Angeles CA 90033.
Cohen SL; Laboratory of Neuro Imaging, USC Stevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, 2025 Zonal Avenue, Los Angeles CA 90033.
Garner R; Laboratory of Neuro Imaging, USC Stevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, 2025 Zonal Avenue, Los Angeles CA 90033.
Salehi S; Laboratory of Neuro Imaging, USC Stevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, 2025 Zonal Avenue, Los Angeles CA 90033.
Fisher C; Laboratory of Neuro Imaging, USC Stevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, 2025 Zonal Avenue, Los Angeles CA 90033.
Hobel S; Laboratory of Neuro Imaging, USC Stevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, 2025 Zonal Avenue, Los Angeles CA 90033.
Ghosh S; McGovern Institute for Brain Research, MIT Brain and Cognitive Sciences, 77 Massachusetts Avenue, Cambridge MA 02139.
Halchenko Y; Department of Psychological & Brain Sciences, Center for Cognitive Neuroscience, Dartmouth Brain Imaging Center, Dartmouth College, 6207 Moore Hall, Hanover NH 03755.
Dichter B; CatalystNeuro, Benicia CA 94510.
Poldrack RA; Department of Psychology, Stanford University, 450 Jane Stanford Way, Stanford CA 94305.
Markiewicz C; Department of Psychology, Stanford University, 450 Jane Stanford Way, Stanford CA 94305.
Hermes D; Mayo Clinic, Department of Physiology & Biomedical Engineering, 200 1st Street SW, Rochester MN 55905.
Delorme A; Swartz Center of Computational Neuroscience, INC, University of California San Diego, La Jolla CA 92093.
Makeig S; Swartz Center of Computational Neuroscience, INC, University of California San Diego, La Jolla CA 92093.
Behan B; Ontario Brain Institute, 1 Richmond Street West, Toronto ON M5H 3W4, Canada.
Sparks A; Indoc Research, Toronto ON, Canada.
Arnott SR; Rotman Research Institute, Toronto ON, Canada.
Wang Z; Department of Neurosurgery, Perelman School of Medicine, University of Pennsylvania, 3700 Hamilton Walk, Philadelphia PA 19104.
Magnotti J; Department of Neurosurgery, Perelman School of Medicine, University of Pennsylvania, 3700 Hamilton Walk, Philadelphia PA 19104.
Beauchamp MS; Department of Neurosurgery, Perelman School of Medicine, University of Pennsylvania, 3700 Hamilton Walk, Philadelphia PA 19104.
Pouratian N; Department of Neurological Surgery, University of Texas Southwestern Medical Center, 5303 Harry Hines Blvd, Dallas TX 75390.
Toga AW; Laboratory of Neuro Imaging, USC Stevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, 2025 Zonal Avenue, Los Angeles CA 90033.
Duncan D; Laboratory of Neuro Imaging, USC Stevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, 2025 Zonal Avenue, Los Angeles CA 90033.

ArXiv ; 2023 Aug 30.

Article en En | MEDLINE | ID: mdl-37426452

ABSTRACT

ABSTRACT

As data sharing has become more prevalent, three pillars - archives, standards, and analysis tools - have emerged as critical components in facilitating effective data sharing and collaboration. This paper compares four freely available intracranial neuroelectrophysiology data repositories Data Archive for the BRAIN Initiative (DABI), Distributed Archives for Neurophysiology Data Integration (DANDI), OpenNeuro, and Brain-CODE. The aim of this review is to describe archives that provide researchers with tools to store, share, and reanalyze both human and non-human neurophysiology data based on criteria that are of interest to the neuroscientific community. The Brain Imaging Data Structure (BIDS) and Neurodata Without Borders (NWB) are utilized by these archives to make data more accessible to researchers by implementing a common standard. As the necessity for integrating large-scale analysis into data repository platforms continues to grow within the neuroscientific community, this article will highlight the various analytical and customizable tools developed within the chosen archives that may advance the field of neuroinformatics.

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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Idioma: En Revista: ArXiv Año: 2023 Tipo del documento: Article