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Phylogenomic analysis of Tachinidae (Diptera: Calyptratae: Oestroidea): a transcriptomic approach to understanding the subfamily relationships.
de Paula, Letícia Chiara Baldassio; Dios, Rodrigo de Vilhena Perez; Gudin, Filipe Macedo; de Santis, Marcelo Domingos; Alvarez-Garcia, Deivys Moises; Antunes Júnior, Manuel; Freire, Beatriz Vieira; Marques, Fernando Portella de Luna; Lahr, Daniel José Galafasse; Nihei, Silvio Shigueo.
Afiliación
  • de Paula LCB; Department of Genetics, Institute of Biosciences, University of São Paulo, Rua do Matão, n 277, São Paulo, SP, 05508-090, Brazil.
  • Dios RVP; Department of Zoology, Institute of Biosciences, University of São Paulo, Rua do Matão, Travessa 14, n 101, São Paulo, SP, 05508-090, Brazil.
  • Gudin FM; Department of Zoology, Institute of Biosciences, University of São Paulo, Rua do Matão, Travessa 14, n 101, São Paulo, SP, 05508-090, Brazil.
  • de Santis MD; Department of Zoology, Institute of Biosciences, University of São Paulo, Rua do Matão, Travessa 14, n 101, São Paulo, SP, 05508-090, Brazil.
  • Alvarez-Garcia DM; Department of Zoology, Institute of Biosciences, University of São Paulo, Rua do Matão, Travessa 14, n 101, São Paulo, SP, 05508-090, Brazil.
  • Antunes Júnior M; Zoologisches Forschungsmuseum Alexander Koenig, Leibniz-Institut zur Analyse des Biodiversitatswandels, Adenauerallee 127, D-53113, Bonn, Germany.
  • Freire BV; Department of Zoology, Institute of Biosciences, University of São Paulo, Rua do Matão, Travessa 14, n 101, São Paulo, SP, 05508-090, Brazil.
  • Marques FPL; Grupo de Investigación en Zoología y Ecología, Universidad de Sucre, Cra 28 # 5 - 267 Barrio Puerta Roja, Sincelejo, Colombia.
  • Lahr DJG; Department of Zoology, Institute of Biosciences, University of São Paulo, Rua do Matão, Travessa 14, n 101, São Paulo, SP, 05508-090, Brazil.
  • Nihei SS; Department of Zoology, Institute of Biosciences, University of São Paulo, Rua do Matão, Travessa 14, n 101, São Paulo, SP, 05508-090, Brazil.
Cladistics ; 40(1): 64-81, 2024 02.
Article en En | MEDLINE | ID: mdl-37837208
Tachinidae is the second most species-rich family of Diptera. It comprises four subfamilies, and all of its members have parasitoid habits. We present the first phylogenomic analysis of Tachinidae using transcriptomic data, based on 30 species. We constructed four datasets: three using translated data at the amino acid level (100% coverage, with 106 single-copy protein-coding genes; 75% coverage, with 1359 genes; and 50% coverage, with 1942 genes). The trees were estimated by analysing four matrices using maximum likelihood and maximum parsimony inferences, and only minor differences were found among them. Overall, our topologies are well resolved, with high node support. Polleniidae is corroborated as a sister group to Tachinidae. Within Tachinidae, our results confirm the hypothesis (Phasiinae + Dexiinae) + (Tachininae + Exoristinae). Phasiinae, Dexiinae and Exoristinae are recovered as monophyletic, and Tachininae as polyphyletic. Once again, the tribe Myiophasiini (Tachininae) composes a fifth lineage, clade sister to all the remaining Tachinidae. The Neotropical tribe Iceliini, formerly in Tachininae, is recovered within Exoristinae, sister to Winthemiini. In general, our results are congruent with recent phylogenetic studies that include tachinids, with the important confirmation of the subfamilial relationships and the existence of a fifth lineage of Tachinidae.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Dípteros Límite: Animals Idioma: En Revista: Cladistics Año: 2024 Tipo del documento: Article País de afiliación: Brasil Pais de publicación: Estados Unidos

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Dípteros Límite: Animals Idioma: En Revista: Cladistics Año: 2024 Tipo del documento: Article País de afiliación: Brasil Pais de publicación: Estados Unidos