PhaGenus: genus-level classification of bacteriophages using a Transformer model.

Guan, Jiaojiao; Peng, Cheng; Shang, Jiayu; Tang, Xubo; Sun, Yanni

Guan, Jiaojiao; Peng, Cheng; Shang, Jiayu; Tang, Xubo; Sun, Yanni.

Afiliación

Guan J; Department of Electrical Engineering, City University of Hong Kong, Kowloon, Hong Kong (SAR), China.
Peng C; Department of Electrical Engineering, City University of Hong Kong, Kowloon, Hong Kong (SAR), China.
Shang J; Department of Electrical Engineering, City University of Hong Kong, Kowloon, Hong Kong (SAR), China.
Tang X; Department of Electrical Engineering, City University of Hong Kong, Kowloon, Hong Kong (SAR), China.
Sun Y; Department of Electrical Engineering, City University of Hong Kong, Kowloon, Hong Kong (SAR), China.

Brief Bioinform ; 24(6)2023 09 22.

Article en En | MEDLINE | ID: mdl-37965809

Asunto(s)

Bacteriófagos; Microbiota; Humanos; Bacteriófagos/genética; Secuenciación de Nucleótidos de Alto Rendimiento

Palabras clave

genus level; phage classification; protein cluster-based tokens; transformer

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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Bacteriófagos / Microbiota Límite: Humans Idioma: En Revista: Brief Bioinform Asunto de la revista: BIOLOGIA / INFORMATICA MEDICA Año: 2023 Tipo del documento: Article País de afiliación: China Pais de publicación: Reino Unido

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