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Up-regulated SPP1 increases the risk from IPF to lung cancer via activating the pro-tumor macrophages.
Chen, Tingting; Guo, Jiayu; Ai, Liqiang; Wang, Yuquan; Wang, Yan; Chen, Bo; Liu, Mingyue; Zhuang, Shuping; Liu, Kaidong; Zhao, Zhangxiang; Liang, Haihai; Gu, Yunyan.
Afiliación
  • Chen T; Department of Systems Biology, College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, China.
  • Guo J; Department of Surgery, The Chinese University of Hong Kong, Shatin, Hong Kong Special Administrative Region of China.
  • Ai L; Department of Pharmacology (State-Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education), College of Pharmacy, Harbin Medical University, Harbin, China.
  • Wang Y; Department of Systems Biology, College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, China.
  • Wang Y; Center for Medical Genetics, School of Life Sciences, Central South University, Changsha, China.
  • Chen B; Department of Pharmacology (State-Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education), College of Pharmacy, Harbin Medical University, Harbin, China.
  • Liu M; Department of Pharmacology (State-Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education), College of Pharmacy, Harbin Medical University, Harbin, China.
  • Zhuang S; Department of Systems Biology, College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, China.
  • Liu K; Department of Systems Biology, College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, China.
  • Zhao Z; Department of Pharmacology (State-Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education), College of Pharmacy, Harbin Medical University, Harbin, China.
  • Liang H; Department of Systems Biology, College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, China.
  • Gu Y; The Sino-Russian Medical Research Center of Jinan University, The Institute of Chronic Disease of Jinan University, The First Affiliated Hospital of Jinan University, Guangzhou, China.
Comput Struct Biotechnol J ; 21: 5751-5764, 2023.
Article en En | MEDLINE | ID: mdl-38074471
ABSTRACT
The incidence of lung cancer (LC) in Idiopathic Pulmonary Fibrosis (IPF) patients is more than twice that in non-IPF. This study aims to investigate IPF-to-LC pathogenesis and to develop a predictor for detecting IPF predisposing patients to LC. We conducted unsupervised clustering to detect high-risk subtypes from IPF to LC. Subsequently, we performed single-cell RNA-seq analysis to characterize high-risk IPF by examining the immune microenvironment. We identified 42 common immune function-related pathogenic genes between IPF and LC. We developed an LC risk classifier for IPF patients, comprising five genes SPP1, MMP9, MMP12, FABP4, and IL1B. The five-gene classifier can successfully distinguish the high-risk population from IPF patients. High-risk IPF patients exhibited an immunosuppressive microenvironment with higher oncogene expression than low-risk patients. Single-cell analysis revealed that SPP1+ macrophages at the terminal of macrophages' developmental trajectory may promote the progression from IPF to LC. The strong crosstalk between SPP1+ macrophages and inflammation-related cancer-associated fibroblasts promoted the tumorigenic process in IPF. In vitro, assays showed that co-culturing macrophages overexpressing SPP1 with MRC-5 cells induced the transition of fibroblasts into cancer-associated fibroblasts. SPP1 produced by macrophages promoted epithelial-mesenchymal transition in alveolar epithelial cells via stimulating the upregulation of N-cadherin and Vimentin in MLE-12 cells. This study provided a novel method to identify the LC risk population from IPF, revealing the cellular interactions involved in the transition from IPF to LC. Our findings highlighted SPP1 as a critical driver in IPF progression, offering a potential target for therapy in fibrosis.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Idioma: En Revista: Comput Struct Biotechnol J Año: 2023 Tipo del documento: Article País de afiliación: China

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Idioma: En Revista: Comput Struct Biotechnol J Año: 2023 Tipo del documento: Article País de afiliación: China