Your browser doesn't support javascript.
loading
Chromosome-scale genome assembly of Lepus oiostolus (Lepus, Leporidae).
Feng, Shuo; Zhang, Yaying; He, Zhaotong; Xi, Erning; Ru, Dafu; Liang, Jian; Yang, Yongzhi.
Afiliación
  • Feng S; State Key Laboratory of Plateau Ecology and Agriculture, Qinghai University, Xining, 810016, China. fengshuo8894@126.com.
  • Zhang Y; State Key Laboratory of Plateau Ecology and Agriculture, Qinghai University, Xining, 810016, China.
  • He Z; State Key Laboratory of Plateau Ecology and Agriculture, Qinghai University, Xining, 810016, China.
  • Xi E; State Key Laboratory of Plateau Ecology and Agriculture, Qinghai University, Xining, 810016, China.
  • Ru D; State Key Laboratory of Grassland Agro-Ecosystems, and College of Ecology, Lanzhou University, Lanzhou, 730000, China.
  • Liang J; State Key Laboratory of Plateau Ecology and Agriculture, Qinghai University, Xining, 810016, China.
  • Yang Y; State Key Laboratory of Grassland Agro-Ecosystems, and College of Ecology, Lanzhou University, Lanzhou, 730000, China.
Sci Data ; 11(1): 183, 2024 Feb 10.
Article en En | MEDLINE | ID: mdl-38341484
ABSTRACT
Lepus oiostolus (L. oiostolus) is a species endemic to the Qinghai-Tibet Plateau. However, the absence of a reference genome limits genetic studies. Here, we reported a high-quality L. oiostolus genome assembly, with scaffolds anchored to 24 chromosomes and a total assembled length of 2.80 Gb (contig N50 = 64.25 Mb). Genomic annotation uncovered 22,295 protein-coding genes and identified 49.84% of the sequences as transposable elements. Long interspersed nuclear elements (LINEs) constitute a high proportion of the genome. Our study is at the first time to report the chromosome-scale genome for the species of the L. oiostolus. It provides a valuable genomic resource for future research on the evolution of the Leporidae.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Liebres Límite: Animals Idioma: En Revista: Sci Data Año: 2024 Tipo del documento: Article País de afiliación: China

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Liebres Límite: Animals Idioma: En Revista: Sci Data Año: 2024 Tipo del documento: Article País de afiliación: China