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Complete genome sequence of the novel Antarctic Oceanisphaera sp. IT1-181 that carried five plasmids.
Hu, Yong-Qiang; Zhang, Yi-He; Han, Wei; Hu, Ting; Du, Yu; Zeng, Yin-Xin.
Afiliación
  • Hu YQ; Key Laboratory for Polar Science, Polar Research Institute of China, Ministry of Natural Resources, Shanghai 200136, China.
  • Zhang YH; Key Laboratory for Polar Science, Polar Research Institute of China, Ministry of Natural Resources, Shanghai 200136, China; Department of Biology, College of Science, Shantou University, Shantou 515063, China.
  • Han W; Key Laboratory for Polar Science, Polar Research Institute of China, Ministry of Natural Resources, Shanghai 200136, China.
  • Hu T; Key Laboratory for Polar Science, Polar Research Institute of China, Ministry of Natural Resources, Shanghai 200136, China.
  • Du Y; Key Laboratory for Polar Science, Polar Research Institute of China, Ministry of Natural Resources, Shanghai 200136, China.
  • Zeng YX; Key Laboratory for Polar Science, Polar Research Institute of China, Ministry of Natural Resources, Shanghai 200136, China; School of Oceanography, Shanghai Jiao Tong University, Shanghai 200030, China. Electronic address: zengyinxin@pric.org.cn.
Mar Genomics ; 74: 101083, 2024 Apr.
Article en En | MEDLINE | ID: mdl-38485293
ABSTRACT
Bacteria of the genus Oceanisphaera in the class Gammaproteobacteria are widely distributed in marine environments. Oceanisphaera sp. IT1-181 was isolated from intertidal sediment in the coastal region of the Chinese Great Wall Station on the Fildes Peninsula, King George Island, Antarctica. Here, we sequenced the complete genome of strain IT1-181, which contained a single chromosome of 3,572,184 bp (G + C content of 49.89 mol%) with five plasmids. A total of 3229 protein-coding genes, 88 tRNA genes, and 25 rRNA genes were obtained. Genome sequence analysis revealed that strain IT1-181 was not only a potentially novel species of the genus Oceanisphaera, but also harbored genes involved in biosynthesizing ectoine as well as poly-ß-hydroxybutyric acid (PHB). In addition, genes of a complete type I-E CRISPR-Cas system were found in the bacterium. The results indicate the potential of strain Oceanisphaera sp. IT1-181 in biotechnology and are helpful for us understanding its ecological roles in the changing Antarctic intertidal zone environment.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Agua de Mar / Aeromonadaceae Idioma: En Revista: Mar Genomics Año: 2024 Tipo del documento: Article País de afiliación: China Pais de publicación: Países Bajos

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Agua de Mar / Aeromonadaceae Idioma: En Revista: Mar Genomics Año: 2024 Tipo del documento: Article País de afiliación: China Pais de publicación: Países Bajos