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Retrospective for the Dynamic Sensorium Competition for predicting large-scale mouse primary visual cortex activity from videos.
Turishcheva, Polina; Fahey, Paul G; Vystrcilová, Michaela; Hansel, Laura; Froebe, Rachel; Ponder, Kayla; Qiu, Yongrong; Willeke, Konstantin F; Bashiri, Mohammad; Baikulov, Ruslan; Zhu, Yu; Ma, Lei; Yu, Shan; Huang, Tiejun; Li, Bryan M; Wulf, Wolf De; Kudryashova, Nina; Hennig, Matthias H; Rochefort, Nathalie L; Onken, Arno; Wang, Eric; Ding, Zhiwei; Tolias, Andreas S; Sinz, Fabian H; Ecker, Alexander S.
Afiliación
  • Turishcheva P; Institute of Computer Science and Campus Institute Data Science, University of Göttingen, Germany.
  • Fahey PG; Department of Neuroscience & Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, Texas, USA.
  • Vystrcilová M; Department of Ophthalmology, Byers Eye Institute, Stanford University School of Medicine, Stanford, CA, US.
  • Hansel L; Stanford Bio-X, Stanford University, Stanford, CA, US.
  • Froebe R; Wu Tsai Neurosciences Institute, Stanford University, Stanford, CA, US.
  • Ponder K; Institute of Computer Science and Campus Institute Data Science, University of Göttingen, Germany.
  • Qiu Y; Institute of Computer Science and Campus Institute Data Science, University of Göttingen, Germany.
  • Willeke KF; Department of Neuroscience & Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, Texas, USA.
  • Bashiri M; Department of Ophthalmology, Byers Eye Institute, Stanford University School of Medicine, Stanford, CA, US.
  • Baikulov R; Stanford Bio-X, Stanford University, Stanford, CA, US.
  • Zhu Y; Wu Tsai Neurosciences Institute, Stanford University, Stanford, CA, US.
  • Ma L; Department of Neuroscience & Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, Texas, USA.
  • Yu S; Institute of Computer Science and Campus Institute Data Science, University of Göttingen, Germany.
  • Huang T; Department of Ophthalmology, Byers Eye Institute, Stanford University School of Medicine, Stanford, CA, US.
  • Li BM; Stanford Bio-X, Stanford University, Stanford, CA, US.
  • Wulf W; Wu Tsai Neurosciences Institute, Stanford University, Stanford, CA, US.
  • Kudryashova N; Institute of Computer Science and Campus Institute Data Science, University of Göttingen, Germany.
  • Hennig MH; International Max Planck Research School for Intelligent Systems, Tübingen, Germany.
  • Rochefort NL; Institute for Bioinformatics and Medical Informatics, Tübingen University, Germany.
  • Onken A; Institute of Computer Science and Campus Institute Data Science, University of Göttingen, Germany.
  • Wang E; International Max Planck Research School for Intelligent Systems, Tübingen, Germany.
  • Ding Z; Institute for Bioinformatics and Medical Informatics, Tübingen University, Germany.
  • Tolias AS; lRomul, Russia.
  • Sinz FH; Institute of Automation, Chinese Academy of Sciences, China.
  • Ecker AS; Beijing Academy of Artificial Intelligence, China.
ArXiv ; 2024 Jul 12.
Article en En | MEDLINE | ID: mdl-39040641
ABSTRACT
Understanding how biological visual systems process information is challenging because of the nonlinear relationship between visual input and neuronal responses. Artificial neural networks allow computational neuroscientists to create predictive models that connect biological and machine vision. Machine learning has benefited tremendously from benchmarks that compare different model on the same task under standardized conditions. However, there was no standardized benchmark to identify state-of-the-art dynamic models of the mouse visual system. To address this gap, we established the SENSORIUM 2023 Benchmark Competition with dynamic input, featuring a new large-scale dataset from the primary visual cortex of ten mice. This dataset includes responses from 78,853 neurons to 2 hours of dynamic stimuli per neuron, together with the behavioral measurements such as running speed, pupil dilation, and eye movements. The competition ranked models in two tracks based on predictive performance for neuronal responses on a held-out test set one focusing on predicting in-domain natural stimuli and another on out-of-distribution (OOD) stimuli to assess model generalization. As part of the NeurIPS 2023 competition track, we received more than 160 model submissions from 22 teams. Several new architectures for predictive models were proposed, and the winning teams improved the previous state-of-the-art model by 50%. Access to the dataset as well as the benchmarking infrastructure will remain online at www.sensorium-competition.net.

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Idioma: En Revista: ArXiv Año: 2024 Tipo del documento: Article País de afiliación: Alemania Pais de publicación: Estados Unidos

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Idioma: En Revista: ArXiv Año: 2024 Tipo del documento: Article País de afiliación: Alemania Pais de publicación: Estados Unidos