Your browser doesn't support javascript.
loading
Bioinformatics analysis of potential ferroptosis and non-alcoholic fatty liver disease biomarkers.
Yu, Xiaoxiao; Yang, Kai; Fang, Zhihao; Liu, Changxu; Hui, Titi; Guo, Zihao; Dong, Zhichao; Liu, Chang.
Afiliación
  • Yu X; Department of General Surgery, Fourth Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China.
  • Yang K; Department of General Surgery, Fourth Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China.
  • Fang Z; Department of General Surgery, Fourth Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China.
  • Liu C; Department of General Surgery, Fourth Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China.
  • Hui T; Department of General Surgery, Fourth Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China.
  • Guo Z; Department of General Surgery, Fourth Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China.
  • Dong Z; Department of General Surgery, Fourth Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China.
  • Liu C; Department of General Surgery, Fourth Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang Province, China.
Gen Physiol Biophys ; 43(5): 371-384, 2024 Sep.
Article en En | MEDLINE | ID: mdl-39140679
ABSTRACT
Ferroptosis plays a crucial role in the development of non-alcoholic fatty liver disease (NAFLD). In this study, we aimed to use a comprehensive bioinformatics approach and experimental validation to identify and verify potential ferroptosis-related genes in NAFLD. We downloaded the microarray datasets for screening differentially expressed genes (DEGs) and identified the intersection of these datasets with ferroptosis-related DEGs from the Ferroptosis database. Subsequently, ferroptosis-related DEGs were obtained using SVM analysis; the LASSO algorithm was then used to identify six marker genes. Furthermore, the CIBERSORT algorithm was used to estimate the proportion of different types of immune cells. Subsequently, we constructed drug regulatory networks and ceRNA regulatory networks. We identified six genes as marker genes for NAFLD, demonstrating their robust diagnostic abilities. Subsequent functional enrichment analysis results revealed that these marker genes were associated with multiple diseases and play a key role in NAFLD via the regulation of immune response and amino acid metabolism, among other pathways. The expression of hepatic EGR1, IL-6, SOCS1, and NR4A1 was significantly downregulated in the NAFLD model. Our findings provide new insights and molecular clues for understanding and treating NAFLD. Further studies are needed to assess the diagnostic potential of these markers for NAFLD.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Biomarcadores / Biología Computacional / Enfermedad del Hígado Graso no Alcohólico / Ferroptosis Límite: Animals / Humans Idioma: En Revista: Gen Physiol Biophys Año: 2024 Tipo del documento: Article País de afiliación: China Pais de publicación: Eslovaquia

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Biomarcadores / Biología Computacional / Enfermedad del Hígado Graso no Alcohólico / Ferroptosis Límite: Animals / Humans Idioma: En Revista: Gen Physiol Biophys Año: 2024 Tipo del documento: Article País de afiliación: China Pais de publicación: Eslovaquia