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Fast satellite DNA evolution in Nothobranchius annual killifishes.
Voleníková, Anna; Luksíková, Karolína; Mora, Pablo; Pavlica, Tomás; Altmanová, Marie; Stundlová, Jana; Pelikánová, Sárka; Simanovsky, Sergey A; Jankásek, Marek; Reichard, Martin; Nguyen, Petr; Sember, Alexandr.
Affiliation
  • Voleníková A; Institute of Animal Physiology and Genetics, Czech Academy of Sciences, Libechov, Czech Republic.
  • Luksíková K; Faculty of Science, University of South Bohemia, Ceské Budejovice, Czech Republic.
  • Mora P; Institute of Animal Physiology and Genetics, Czech Academy of Sciences, Libechov, Czech Republic.
  • Pavlica T; Department of Genetics and Microbiology, Faculty of Science, Charles University, Prague, Czech Republic.
  • Altmanová M; Faculty of Science, University of South Bohemia, Ceské Budejovice, Czech Republic.
  • Stundlová J; Department of Experimental Biology, Genetics Area, University of Jaén, Jaén, Spain.
  • Pelikánová S; Institute of Animal Physiology and Genetics, Czech Academy of Sciences, Libechov, Czech Republic.
  • Simanovsky SA; Department of Zoology, Faculty of Science, Charles University, Prague, Czech Republic.
  • Jankásek M; Institute of Animal Physiology and Genetics, Czech Academy of Sciences, Libechov, Czech Republic.
  • Reichard M; Department of Ecology, Faculty of Science, Charles University, Prague, Czech Republic.
  • Nguyen P; Institute of Animal Physiology and Genetics, Czech Academy of Sciences, Libechov, Czech Republic.
  • Sember A; Faculty of Science, University of South Bohemia, Ceské Budejovice, Czech Republic.
Chromosome Res ; 31(4): 33, 2023 11 21.
Article in En | MEDLINE | ID: mdl-37985497
Satellite DNA (satDNA) is a rapidly evolving class of tandem repeats, with some monomers being involved in centromere organization and function. To identify repeats associated with (peri)centromeric regions, we investigated satDNA across Southern and Coastal clades of African annual killifishes of the genus Nothobranchius. Molecular cytogenetic and bioinformatic analyses revealed that two previously identified satellites, designated here as NkadSat01-77 and NfurSat01-348, are associated with (peri)centromeres only in one lineage of the Southern clade. NfurSat01-348 was, however, additionally detected outside centromeres in three members of the Coastal clade. We also identified a novel satDNA, NrubSat01-48, associated with (peri)centromeres in N. foerschi, N. guentheri, and N. rubripinnis. Our findings revealed fast turnover of satDNA associated with (peri)centromeres and different trends in their evolution in two clades of the genus Nothobranchius.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Killifishes / Fundulidae Limits: Animals Language: En Journal: Chromosome Res Journal subject: BIOLOGIA MOLECULAR Year: 2023 Document type: Article Affiliation country: Country of publication:

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Killifishes / Fundulidae Limits: Animals Language: En Journal: Chromosome Res Journal subject: BIOLOGIA MOLECULAR Year: 2023 Document type: Article Affiliation country: Country of publication: