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Molecular dynamics and NMR reveal the coexistence of H-bond-assisted and through-space JFH coupling in fluorinated amino alcohols.
Chiari, Cassia; Batista, Patrick R; Viesser, Renan V; Schenberg, Leonardo A; Ducati, Lucas C; Linclau, Bruno; Tormena, Cláudio F.
Affiliation
  • Chiari C; Institute of Chemistry, University of Campinas - UNICAMP, P. O. Box 6154, 13083-970, Campinas, São Paulo, Brazil. tormena@unicamp.br.
  • Batista PR; Institute of Chemistry, University of Campinas - UNICAMP, P. O. Box 6154, 13083-970, Campinas, São Paulo, Brazil. tormena@unicamp.br.
  • Viesser RV; Department of Chemistry, University of Houston, Houston, TX 77024, USA.
  • Schenberg LA; Department of Fundamental Chemistry, Institute of Chemistry, University of São Paulo, Av. Prof. Lineu Prestes, 748, 05508-000, São Paulo, SP, Brazil.
  • Ducati LC; Department of Fundamental Chemistry, Institute of Chemistry, University of São Paulo, Av. Prof. Lineu Prestes, 748, 05508-000, São Paulo, SP, Brazil.
  • Linclau B; Department of Organic and Macromolecular Chemistry, Ghent University, Ghent 9000, Belgium.
  • Tormena CF; Institute of Chemistry, University of Campinas - UNICAMP, P. O. Box 6154, 13083-970, Campinas, São Paulo, Brazil. tormena@unicamp.br.
Org Biomol Chem ; 22(13): 2580-2595, 2024 Mar 27.
Article in En | MEDLINE | ID: mdl-38441115
ABSTRACT
The JFH coupling constants in fluorinated amino alcohols were investigated through experimental and theoretical approaches. The experimental JFH couplings were only reproduced theoretically when explicit solvation through molecular dynamics (MD) simulations was conducted in DMSO as the solvent. The combination of MD conformation sampling and DFT NMR spin-spin coupling calculations for these compounds reveals the simultaneous presence of through-space (TS) and hydrogen bond (H-bond) assisted JFH coupling between fluorine and hydrogen of the NH group. Furthermore, MD simulations indicate that the hydrogen in the amino group participates in both an intermolecular bifurcated H-bond with DMSO and in transmitting the observed JFH coupling. The contribution of TS to the JFH coupling is due to the spatial proximity of the fluorine and the NH group, aided by a combination of the non-bonding transmission pathway and the hydrogen bonding pathway. The experimental JFH coupling observed for the molecules studied should be represented as 4TS/1hJFH coupling.

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Org Biomol Chem Journal subject: BIOQUIMICA / QUIMICA Year: 2024 Document type: Article Affiliation country: Country of publication:

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Org Biomol Chem Journal subject: BIOQUIMICA / QUIMICA Year: 2024 Document type: Article Affiliation country: Country of publication: