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Anomalous diffusion in fractal globules.
Tamm, M V; Nazarov, L I; Gavrilov, A A; Chertovich, A V.
Affiliation
  • Tamm MV; Physics Department, Moscow State University, 119991 Moscow, Russia.
  • Nazarov LI; Department of Applied Mathematics, National Research University Higher School of Economics, 101000 Moscow, Russia.
  • Gavrilov AA; Physics Department, Moscow State University, 119991 Moscow, Russia.
  • Chertovich AV; Physics Department, Moscow State University, 119991 Moscow, Russia.
Phys Rev Lett ; 114(17): 178102, 2015 May 01.
Article de En | MEDLINE | ID: mdl-25978267
The fractal globule state is a popular model for describing chromatin packing in eukaryotic nuclei. Here we provide a scaling theory and dissipative particle dynamics computer simulation for the thermal motion of monomers in the fractal globule state. Simulations starting from different entanglement-free initial states show good convergence which provides evidence supporting the existence of a unique metastable fractal globule state. We show monomer motion in this state to be subdiffusive described by ⟨X(2)(t)⟩∼t(αF) with αF close to 0.4. This result is in good agreement with existing experimental data on the chromatin dynamics, which makes an additional argument in support of the fractal globule model of chromatin packing.
Sujet(s)
Recherche sur Google
Collection: 01-internacional Base de données: MEDLINE Sujet principal: Chromatine / Fractales / Modèles chimiques / Modèles génétiques Limites: Humans Langue: En Journal: Phys Rev Lett Année: 2015 Type de document: Article Pays d'affiliation: Russie Pays de publication: États-Unis d'Amérique
Recherche sur Google
Collection: 01-internacional Base de données: MEDLINE Sujet principal: Chromatine / Fractales / Modèles chimiques / Modèles génétiques Limites: Humans Langue: En Journal: Phys Rev Lett Année: 2015 Type de document: Article Pays d'affiliation: Russie Pays de publication: États-Unis d'Amérique