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High-quality permanent draft genome sequence of Bradyrhizobium sp. Ai1a-2; a microsymbiont of Andira inermis discovered in Costa Rica.
Tian, Rui; Parker, Matthew; Seshadri, Rekha; Reddy, Tbk; Markowitz, Victor; Ivanova, Natalia; Pati, Amrita; Woyke, Tanja; Baeshen, Mohammed; Baeshen, Nabih; Kyrpides, Nikos; Reeve, Wayne.
Affiliation
  • Tian R; Centre for Rhizobium Studies, Murdoch University, Murdoch, Australia.
  • Parker M; Binghamton University, State University of New York, New York, USA.
  • Seshadri R; DOE Joint Genome Institute, Walnut Creek, California USA.
  • Reddy T; DOE Joint Genome Institute, Walnut Creek, California USA.
  • Markowitz V; Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, Berkeley, California USA.
  • Ivanova N; DOE Joint Genome Institute, Walnut Creek, California USA.
  • Pati A; DOE Joint Genome Institute, Walnut Creek, California USA.
  • Woyke T; DOE Joint Genome Institute, Walnut Creek, California USA.
  • Baeshen M; Center of Nanotechnology, King Abdulaziz University, Jeddah, Saudi Arabia ; Department of Biological Sciences, Faculty of Science, Jeddah University, Jeddah, Saudi Arabia.
  • Baeshen N; Center of Nanotechnology, King Abdulaziz University, Jeddah, Saudi Arabia ; Department of Biological Sciences, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia.
  • Kyrpides N; DOE Joint Genome Institute, Walnut Creek, California USA ; Department of Biological Sciences, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia.
  • Reeve W; Centre for Rhizobium Studies, Murdoch University, Murdoch, Australia.
Stand Genomic Sci ; 10: 33, 2015.
Article de En | MEDLINE | ID: mdl-26380037
ABSTRACT
Bradyrhizobium sp. Ai1a-2 is is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from an effective nitrogen fixing root nodule of Andira inermis collected from Tres Piedras in Costa Rica. In this report we describe, for the first time, the genome sequence information and annotation of this legume microsymbiont. The 9,029,266 bp genome has a GC content of 62.56% with 247 contigs arranged into 246 scaffolds. The assembled genome contains 8,482 protein-coding genes and 102 RNA-only encoding genes. This rhizobial genome was sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project proposal.
Mots clés

Texte intégral: 1 Collection: 01-internacional Base de données: MEDLINE Pays/Région comme sujet: America central / Costa rica Langue: En Journal: Stand Genomic Sci Année: 2015 Type de document: Article Pays d'affiliation: Australie

Texte intégral: 1 Collection: 01-internacional Base de données: MEDLINE Pays/Région comme sujet: America central / Costa rica Langue: En Journal: Stand Genomic Sci Année: 2015 Type de document: Article Pays d'affiliation: Australie