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High-quality permanent draft genome sequence of Ensifer sp. PC2, isolated from a nitrogen-fixing root nodule of the legume tree (Khejri) native to the Thar Desert of India.
Gehlot, Hukam Singh; Ardley, Julie; Tak, Nisha; Tian, Rui; Poonar, Neetu; Meghwal, Raju R; Rathi, Sonam; Tiwari, Ravi; Adnawani, Wan; Seshadri, Rekha; Reddy, T B K; Pati, Amrita; Woyke, Tanja; Pillay, Manoj; Markowitz, Victor; Baeshen, Mohammed N; Al-Hejin, Ahmed M; Ivanova, Natalia; Kyrpides, Nikos; Reeve, Wayne.
Affiliation
  • Gehlot HS; BNF and Stress Biology Lab., Department of Botany, J.N. Vyas University, Jodhpur, 342001 India.
  • Ardley J; Centre for Studies, Murdoch University, Murdoch, Western Australia Australia.
  • Tak N; BNF and Stress Biology Lab., Department of Botany, J.N. Vyas University, Jodhpur, 342001 India.
  • Tian R; Centre for Studies, Murdoch University, Murdoch, Western Australia Australia.
  • Poonar N; BNF and Stress Biology Lab., Department of Botany, J.N. Vyas University, Jodhpur, 342001 India.
  • Meghwal RR; BNF and Stress Biology Lab., Department of Botany, J.N. Vyas University, Jodhpur, 342001 India.
  • Rathi S; BNF and Stress Biology Lab., Department of Botany, J.N. Vyas University, Jodhpur, 342001 India.
  • Tiwari R; Centre for Studies, Murdoch University, Murdoch, Western Australia Australia.
  • Adnawani W; Centre for Studies, Murdoch University, Murdoch, Western Australia Australia.
  • Seshadri R; DOE Joint Genome Institute, Walnut Creek, California USA.
  • Reddy TB; DOE Joint Genome Institute, Walnut Creek, California USA.
  • Pati A; DOE Joint Genome Institute, Walnut Creek, California USA.
  • Woyke T; DOE Joint Genome Institute, Walnut Creek, California USA.
  • Pillay M; Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, Berkeley, California USA.
  • Markowitz V; Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, Berkeley, California USA.
  • Baeshen MN; Department of Biological Sciences, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia.
  • Al-Hejin AM; Department of Biological Sciences, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia.
  • Ivanova N; DOE Joint Genome Institute, Walnut Creek, California USA.
  • Kyrpides N; DOE Joint Genome Institute, Walnut Creek, California USA ; Department of Biological Sciences, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia.
  • Reeve W; Centre for Studies, Murdoch University, Murdoch, Western Australia Australia.
Stand Genomic Sci ; 11: 43, 2016.
Article de En | MEDLINE | ID: mdl-27340511
Ensifer sp. PC2 is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from a nitrogen-fixing nodule of the tree legume P. cineraria (L.) Druce (Khejri), which is a keystone species that grows in arid and semi-arid regions of the Indian Thar desert. Strain PC2 exists as a dominant saprophyte in alkaline soils of Western Rajasthan. It is fast growing, well-adapted to arid conditions and is able to form an effective symbiosis with several annual crop legumes as well as species of mimosoid trees and shrubs. Here we describe the features of Ensifer sp. PC2, together with genome sequence information and its annotation. The 8,458,965 bp high-quality permanent draft genome is arranged into 171 scaffolds of 171 contigs containing 8,344 protein-coding genes and 139 RNA-only encoding genes, and is one of the rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project proposal.
Mots clés

Texte intégral: 1 Collection: 01-internacional Base de données: MEDLINE Langue: En Journal: Stand Genomic Sci Année: 2016 Type de document: Article Pays de publication: Royaume-Uni

Texte intégral: 1 Collection: 01-internacional Base de données: MEDLINE Langue: En Journal: Stand Genomic Sci Année: 2016 Type de document: Article Pays de publication: Royaume-Uni