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Roadmap on emerging concepts in the physical biology of bacterial biofilms: from surface sensing to community formation.
Wong, Gerard C L; Antani, Jyot D; Lele, Pushkar P; Chen, Jing; Nan, Beiyan; Kühn, Marco J; Persat, Alexandre; Bru, Jean-Louis; Høyland-Kroghsbo, Nina Molin; Siryaporn, Albert; Conrad, Jacinta C; Carrara, Francesco; Yawata, Yutaka; Stocker, Roman; V Brun, Yves; Whitfield, Gregory B; Lee, Calvin K; de Anda, Jaime; Schmidt, William C; Golestanian, Ramin; O'Toole, George A; Floyd, Kyle A; Yildiz, Fitnat H; Yang, Shuai; Jin, Fan; Toyofuku, Masanori; Eberl, Leo; Nomura, Nobuhiko; Zacharoff, Lori A; El-Naggar, Mohamed Y; Yalcin, Sibel Ebru; Malvankar, Nikhil S; Rojas-Andrade, Mauricio D; Hochbaum, Allon I; Yan, Jing; Stone, Howard A; Wingreen, Ned S; Bassler, Bonnie L; Wu, Yilin; Xu, Haoran; Drescher, Knut; Dunkel, Jörn.
Affiliation
  • Wong GCL; Department of Bioengineering, University of California-Los Angeles, Los Angeles, California, CA 90095, United States of America.
  • Antani JD; Department of Chemistry and Biochemistry, University of California-Los Angeles, Los Angeles, California, CA 90095, United States of America.
  • Lele PP; California NanoSystems Institute, University of California-Los Angeles, Los Angeles, California, CA 90095, United States of America.
  • Chen J; Artie McFerrin Department of Chemical Engineering, Texas A&M University, College Station, TX 77843, United States of America.
  • Nan B; Artie McFerrin Department of Chemical Engineering, Texas A&M University, College Station, TX 77843, United States of America.
  • Kühn MJ; Department of Biological Sciences, Virginia Polytechnic Institute and State University, Blacksburg, VA24061, United States of America.
  • Persat A; Department of Biology, Texas A&M University, College Station, Texas, TX 77845, United States of America.
  • Bru JL; Institute of Bioengineering and Global Health Institute, School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
  • Høyland-Kroghsbo NM; Institute of Bioengineering and Global Health Institute, School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
  • Siryaporn A; Department of Molecular Biology & Biochemistry, University of California-Irvine, California, CA 92697, United States of America.
  • Conrad JC; Department of Plant and Environmental Sciences, University of Copenhagen, DK-1871 Frederiksberg, Denmark.
  • Carrara F; Department of Molecular Biology & Biochemistry, University of California-Irvine, California, CA 92697, United States of America.
  • Yawata Y; Department of Physics & Astronomy, University of California-Irvine, California, CA 92697, United States of America.
  • Stocker R; William A Brookshire Department of Chemical and Biomolecular Engineering, University of Houston, Houston, Texas, TX 77204, United States of America.
  • V Brun Y; Institute of Environmental Engineering, Department of Civil, Environmental and Geomatic Engineering, ETH Zurich, 8093 Zurich, Switzerland.
  • Whitfield GB; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan.
  • Lee CK; Microbiology Research Center for Sustainability, University of Tsukuba, 305-8572 Tsukuba, Japan.
  • de Anda J; Institute of Environmental Engineering, Department of Civil, Environmental and Geomatic Engineering, ETH Zurich, 8093 Zurich, Switzerland.
  • Schmidt WC; University of Montreal, Faculty of Medicine, Montreal, Quebec, H3C 3J7, Canada.
  • Golestanian R; University of Montreal, Faculty of Medicine, Montreal, Quebec, H3C 3J7, Canada.
  • O'Toole GA; Department of Bioengineering, University of California-Los Angeles, Los Angeles, California, CA 90095, United States of America.
  • Floyd KA; Department of Chemistry and Biochemistry, University of California-Los Angeles, Los Angeles, California, CA 90095, United States of America.
  • Yildiz FH; California NanoSystems Institute, University of California-Los Angeles, Los Angeles, California, CA 90095, United States of America.
  • Yang S; Department of Bioengineering, University of California-Los Angeles, Los Angeles, California, CA 90095, United States of America.
  • Jin F; Department of Chemistry and Biochemistry, University of California-Los Angeles, Los Angeles, California, CA 90095, United States of America.
  • Toyofuku M; California NanoSystems Institute, University of California-Los Angeles, Los Angeles, California, CA 90095, United States of America.
  • Eberl L; Department of Bioengineering, University of California-Los Angeles, Los Angeles, California, CA 90095, United States of America.
  • Nomura N; Department of Chemistry and Biochemistry, University of California-Los Angeles, Los Angeles, California, CA 90095, United States of America.
  • Zacharoff LA; California NanoSystems Institute, University of California-Los Angeles, Los Angeles, California, CA 90095, United States of America.
  • El-Naggar MY; Max Planck Institute for Dynamics and Self-Organization (MPIDS), D-37077 Göttingen, Germany.
  • Yalcin SE; Rudolf Peierls Centre for Theoretical Physics, University of Oxford, Oxford OX1 3PU, United Kingdom.
  • Malvankar NS; Department of Microbiology and Immunology, Geisel School of Medicine at Dartmouth, Hanover, NH 03755, United States of America.
  • Rojas-Andrade MD; Department of Microbiology and Environmental Toxicology, University of California-Santa Cruz, Santa Cruz, California, CA 95060, United States of America.
  • Hochbaum AI; Department of Microbiology and Environmental Toxicology, University of California-Santa Cruz, Santa Cruz, California, CA 95060, United States of America.
  • Yan J; CAS Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, People's Republic of China.
  • Stone HA; CAS Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, People's Republic of China.
  • Wingreen NS; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan.
  • Bassler BL; Microbiology Research Center for Sustainability, University of Tsukuba, 305-8572 Tsukuba, Japan.
  • Wu Y; Department of Plant and Microbial Biology, University of Zürich, 8008 Zürich, Switzerland.
  • Xu H; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan.
  • Drescher K; Microbiology Research Center for Sustainability, University of Tsukuba, 305-8572 Tsukuba, Japan.
  • Dunkel J; Department of Physics and Astronomy, University of Southern California, Los Angeles, California, CA 90089, United States of America.
Phys Biol ; 18(5)2021 06 23.
Article de En | MEDLINE | ID: mdl-33462162
ABSTRACT
Bacterial biofilms are communities of bacteria that exist as aggregates that can adhere to surfaces or be free-standing. This complex, social mode of cellular organization is fundamental to the physiology of microbes and often exhibits surprising behavior. Bacterial biofilms are more than the sum of their parts single-cell behavior has a complex relation to collective community behavior, in a manner perhaps cognate to the complex relation between atomic physics and condensed matter physics. Biofilm microbiology is a relatively young field by biology standards, but it has already attracted intense attention from physicists. Sometimes, this attention takes the form of seeing biofilms as inspiration for new physics. In this roadmap, we highlight the work of those who have taken the opposite strategy we highlight the work of physicists and physical scientists who use physics to engage fundamental concepts in bacterial biofilm microbiology, including adhesion, sensing, motility, signaling, memory, energy flow, community formation and cooperativity. These contributions are juxtaposed with microbiologists who have made recent important discoveries on bacterial biofilms using state-of-the-art physical methods. The contributions to this roadmap exemplify how well physics and biology can be combined to achieve a new synthesis, rather than just a division of labor.
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Mots clés

Texte intégral: 1 Collection: 01-internacional Base de données: MEDLINE Sujet principal: Adhérence bactérienne / Biofilms / Phénomènes physiologiques bactériens / Détection du quorum Langue: En Journal: Phys Biol Sujet du journal: BIOLOGIA Année: 2021 Type de document: Article Pays d'affiliation: États-Unis d'Amérique

Texte intégral: 1 Collection: 01-internacional Base de données: MEDLINE Sujet principal: Adhérence bactérienne / Biofilms / Phénomènes physiologiques bactériens / Détection du quorum Langue: En Journal: Phys Biol Sujet du journal: BIOLOGIA Année: 2021 Type de document: Article Pays d'affiliation: États-Unis d'Amérique
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