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A capillary-based microfluidic device enables primary high-throughput room-temperature crystallographic screening.
Sui, Shuo; Mulichak, Anne; Kulathila, Raviraj; McGee, Joshua; Filiatreault, Danny; Saha, Sarthak; Cohen, Aina; Song, Jinhu; Hung, Holly; Selway, Jonathan; Kirby, Christina; Shrestha, Om K; Weihofen, Wilhelm; Fodor, Michelle; Xu, Mei; Chopra, Rajiv; Perry, Sarah L.
Affiliation
  • Sui S; Department of Chemical Engineering, University of Massachusetts Amherst, Amherst, MA, USA.
  • Mulichak A; IMCA-CAT, Argonne National Laboratory, Lemont, IL, USA.
  • Kulathila R; Novartis Institutes for BioMedical Research, Cambridge, MA, USA.
  • McGee J; Department of Chemical Engineering, University of Massachusetts Amherst, Amherst, MA, USA.
  • Filiatreault D; Novartis Institutes for BioMedical Research, Cambridge, MA, USA.
  • Saha S; Department of Chemical Engineering, University of Massachusetts Amherst, Amherst, MA, USA.
  • Cohen A; Macromolecular Crystallography Group, Stanford Synchrotron Radiation Lightsource, Menlo Park, CA, USA.
  • Song J; Macromolecular Crystallography Group, Stanford Synchrotron Radiation Lightsource, Menlo Park, CA, USA.
  • Hung H; SPT Labtech Ltd, Boston, MA, USA.
  • Selway J; Department of Biochemistry and Molecular Biology, University of Massachusetts Amherst, Amherst, MA, USA.
  • Kirby C; Novartis Institutes for BioMedical Research, Cambridge, MA, USA.
  • Shrestha OK; Novartis Institutes for BioMedical Research, Cambridge, MA, USA.
  • Weihofen W; Novartis Institutes for BioMedical Research, Cambridge, MA, USA.
  • Fodor M; Novartis Institutes for BioMedical Research, Cambridge, MA, USA.
  • Xu M; Novartis Institutes for BioMedical Research, Cambridge, MA, USA.
  • Chopra R; Novartis Institutes for BioMedical Research, Cambridge, MA, USA.
  • Perry SL; Department of Chemical Engineering, University of Massachusetts Amherst, Amherst, MA, USA.
J Appl Crystallogr ; 54(Pt 4): 1034-1046, 2021 Aug 01.
Article de En | MEDLINE | ID: mdl-34429718
ABSTRACT
A novel capillary-based microfluidic strategy to accelerate the process of small-molecule-compound screening by room-temperature X-ray crystallography using protein crystals is reported. The ultra-thin microfluidic devices are composed of a UV-curable polymer, patterned by cleanroom photolithography, and have nine capillary channels per chip. The chip was designed for ease of sample manipulation, sample stability and minimal X-ray background. 3D-printed frames and cassettes conforming to SBS standards are used to house the capillary chips, providing additional mechanical stability and compatibility with automated liquid- and sample-handling robotics. These devices enable an innovative in situ crystal-soaking screening workflow, akin to high-throughput compound screening, such that quantitative electron density maps sufficient to determine weak binding events are efficiently obtained. This work paves the way for adopting a room-temperature microfluidics-based sample delivery method at synchrotron sources to facilitate high-throughput protein-crystallography-based screening of compounds at high concentration with the aim of discovering novel binding events in an automated manner.
Mots clés

Texte intégral: 1 Collection: 01-internacional Base de données: MEDLINE Type d'étude: Diagnostic_studies / Screening_studies Langue: En Journal: J Appl Crystallogr Année: 2021 Type de document: Article Pays d'affiliation: États-Unis d'Amérique

Texte intégral: 1 Collection: 01-internacional Base de données: MEDLINE Type d'étude: Diagnostic_studies / Screening_studies Langue: En Journal: J Appl Crystallogr Année: 2021 Type de document: Article Pays d'affiliation: États-Unis d'Amérique