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Disease Progression of Hypertrophic Cardiomyopathy: Modeling Using Machine Learning.
Piculin, Matej; Smole, Tim; Zunkovic, Bojan; Kokalj, Enja; Robnik-Sikonja, Marko; Kukar, Matjaz; Fotiadis, Dimitrios I; Pezoulas, Vasileios C; Tachos, Nikolaos S; Barlocco, Fausto; Mazzarotto, Francesco; Popovic, Dejana; Maier, Lars S; Velicki, Lazar; Olivotto, Iacopo; MacGowan, Guy A; Jakovljevic, Djordje G; Filipovic, Nenad; Bosnic, Zoran.
Affiliation
  • Piculin M; Faculty of Computer and Information Science, University of Ljubljana, Ljubljana, Slovenia.
  • Smole T; Faculty of Computer and Information Science, University of Ljubljana, Ljubljana, Slovenia.
  • Zunkovic B; Faculty of Computer and Information Science, University of Ljubljana, Ljubljana, Slovenia.
  • Kokalj E; Faculty of Computer and Information Science, University of Ljubljana, Ljubljana, Slovenia.
  • Robnik-Sikonja M; Faculty of Computer and Information Science, University of Ljubljana, Ljubljana, Slovenia.
  • Kukar M; Faculty of Computer and Information Science, University of Ljubljana, Ljubljana, Slovenia.
  • Fotiadis DI; Unit of Medical Technology and Intelligent Information Systems, Department of Materials Science and Engineering, University of Ioannina, Ioannina, Greece.
  • Pezoulas VC; Unit of Medical Technology and Intelligent Information Systems, Department of Materials Science and Engineering, University of Ioannina, Ioannina, Greece.
  • Tachos NS; Unit of Medical Technology and Intelligent Information Systems, Department of Materials Science and Engineering, University of Ioannina, Ioannina, Greece.
  • Barlocco F; Department of Experimental and Clinical Medicine, University of Florence, Florence, Italy.
  • Mazzarotto F; Cardiomyopathy Unit, Careggi University Hospital, University of Florence, Florence, Italy.
  • Popovic D; Department of Experimental and Clinical Medicine, University of Florence, Florence, Italy.
  • Maier LS; Cardiomyopathy Unit, Careggi University Hospital, University of Florence, Florence, Italy.
  • Velicki L; National Heart and Lung Institute, Imperial College London, London, United Kingdom.
  • Olivotto I; Clinic for Cardiology, Clinical Center of Serbia, University of Belgrade, Belgrade, Serbia.
  • MacGowan GA; Department of Internal Medicine II (Cardiology, Pneumology, Intensive Care Medicine), University Hospital Regensburg, Regensburg, Germany.
  • Jakovljevic DG; Faculty of Medicine, University of Novi Sad, Novi Sad, Serbia.
  • Filipovic N; Institute of Cardiovascular Diseases Vojvodina, Sremska Kamenica, Serbia.
  • Bosnic Z; Department of Experimental and Clinical Medicine, University of Florence, Florence, Italy.
JMIR Med Inform ; 10(2): e30483, 2022 Feb 02.
Article de En | MEDLINE | ID: mdl-35107432
ABSTRACT

BACKGROUND:

Cardiovascular disorders in general are responsible for 30% of deaths worldwide. Among them, hypertrophic cardiomyopathy (HCM) is a genetic cardiac disease that is present in about 1 of 500 young adults and can cause sudden cardiac death (SCD).

OBJECTIVE:

Although the current state-of-the-art methods model the risk of SCD for patients, to the best of our knowledge, no methods are available for modeling the patient's clinical status up to 10 years ahead. In this paper, we propose a novel machine learning (ML)-based tool for predicting disease progression for patients diagnosed with HCM in terms of adverse remodeling of the heart during a 10-year period.

METHODS:

The method consisted of 6 predictive regression models that independently predict future values of 6 clinical characteristics left atrial size, left atrial volume, left ventricular ejection fraction, New York Heart Association functional classification, left ventricular internal diastolic diameter, and left ventricular internal systolic diameter. We supplemented each prediction with the explanation that is generated using the Shapley additive explanation method.

RESULTS:

The final experiments showed that predictive error is lower on 5 of the 6 constructed models in comparison to experts (on average, by 0.34) or a consortium of experts (on average, by 0.22). The experiments revealed that semisupervised learning and the artificial data from virtual patients help improve predictive accuracies. The best-performing random forest model improved R2 from 0.3 to 0.6.

CONCLUSIONS:

By engaging medical experts to provide interpretation and validation of the results, we determined the models' favorable performance compared to the performance of experts for 5 of 6 targets.
Mots clés

Texte intégral: 1 Collection: 01-internacional Base de données: MEDLINE Type d'étude: Prognostic_studies Langue: En Journal: JMIR Med Inform Année: 2022 Type de document: Article Pays d'affiliation: Slovénie

Texte intégral: 1 Collection: 01-internacional Base de données: MEDLINE Type d'étude: Prognostic_studies Langue: En Journal: JMIR Med Inform Année: 2022 Type de document: Article Pays d'affiliation: Slovénie