Metagenomic Analysis of RNA Fraction Reveals the Diversity of Swine Oral Virome on South African Backyard Swine Farms in the uMgungundlovu District of KwaZulu-Natal Province.

Chauhan, Ravendra P; San, James E; Gordon, Michelle L

Chauhan, Ravendra P; San, James E; Gordon, Michelle L.

Affiliation

Chauhan RP; School of Laboratory Medicine and Medical Sciences, College of Health Sciences, University of KwaZulu-Natal, Durban 4001, South Africa.
San JE; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban 4001, South Africa.
Gordon ML; Center for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch 7600, South Africa.

Pathogens ; 11(8)2022 Aug 17.

Article de En | MEDLINE | ID: mdl-36015047

Mots clés

Illumina sequencing; RNA viruses; South African backyard farms; backyard swine; deep sequencing; phylogenetic analysis; swine oral virome; swine viruses; zoonosis

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Texte intégral: 1 Collection: 01-internacional Base de données: MEDLINE Langue: En Journal: Pathogens Année: 2022 Type de document: Article Pays d'affiliation: République d'Afrique du Sud

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