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Report on the AAPM Grand Challenge on deep generative modeling for learning medical image statistics.
Deshpande, Rucha; Kelkar, Varun A; Gotsis, Dimitrios; Kc, Prabhat; Zeng, Rongping; Myers, Kyle J; Brooks, Frank J; Anastasio, Mark A.
Affiliation
  • Deshpande R; Dept. of Biomedical Engineering, Washington University in St. Louis, St. Louis, Missouri, USA.
  • Kelkar VA; Dept. of Electrical and Computer Engineering, University of Illinois Urbana-Champaign, Urbana, Illinois, USA.
  • Gotsis D; Dept. of Electrical and Computer Engineering, University of Illinois Urbana-Champaign, Urbana, Illinois, USA.
  • Kc P; Center for Devices and Radiological Health, Food and Drug Administration, Silver Spring, Maryland, USA.
  • Zeng R; Center for Devices and Radiological Health, Food and Drug Administration, Silver Spring, Maryland, USA.
  • Myers KJ; Puente Solutions, LLC, Phoenix, Arizona, USA.
  • Brooks FJ; Center for Label-free Imaging and Multiscale Biophotonics (CLIMB), University of Illinois Urbana-Champaign, Urbana, Illinois, USA.
  • Anastasio MA; Dept. of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.
ArXiv ; 2024 May 03.
Article de En | MEDLINE | ID: mdl-38745699
ABSTRACT

Background:

The findings of the 2023 AAPM Grand Challenge on Deep Generative Modeling for Learning Medical Image Statistics are reported in this Special Report.

Purpose:

The goal of this challenge was to promote the development of deep generative models for medical imaging and to emphasize the need for their domain-relevant assessments via the analysis of relevant image statistics.

Methods:

As part of this Grand Challenge, a common training dataset and an evaluation procedure was developed for benchmarking deep generative models for medical image synthesis. To create the training dataset, an established 3D virtual breast phantom was adapted. The resulting dataset comprised about 108,000 images of size 512×512. For the evaluation of submissions to the Challenge, an ensemble of 10,000 DGM-generated images from each submission was employed. The evaluation procedure consisted of two stages. In the first stage, a preliminary check for memorization and image quality (via the Fréchet Inception Distance (FID)) was performed. Submissions that passed the first stage were then evaluated for the reproducibility of image statistics corresponding to several feature families including texture, morphology, image moments, fractal statistics and skeleton statistics. A summary measure in this feature space was employed to rank the submissions. Additional analyses of submissions was performed to assess DGM performance specific to individual feature families, the four classes in the training data, and also to identify various artifacts.

Results:

Fifty-eight submissions from 12 unique users were received for this Challenge. Out of these 12 submissions, 9 submissions passed the first stage of evaluation and were eligible for ranking. The top-ranked submission employed a conditional latent diffusion model, whereas the joint runners-up employed a generative adversarial network, followed by another network for image superresolution. In general, we observed that the overall ranking of the top 9 submissions according to our evaluation method (i) did not match the FID-based ranking, and (ii) differed with respect to individual feature families. Another important finding from our additional analyses was that different DGMs demonstrated similar kinds of artifacts.

Conclusions:

This Grand Challenge highlighted the need for domain-specific evaluation to further DGM design as well as deployment. It also demonstrated that the specification of a DGM may differ depending on its intended use.

Texte intégral: 1 Collection: 01-internacional Base de données: MEDLINE Langue: En Journal: ArXiv Année: 2024 Type de document: Article Pays d'affiliation: États-Unis d'Amérique Pays de publication: États-Unis d'Amérique

Texte intégral: 1 Collection: 01-internacional Base de données: MEDLINE Langue: En Journal: ArXiv Année: 2024 Type de document: Article Pays d'affiliation: États-Unis d'Amérique Pays de publication: États-Unis d'Amérique