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Chromosome-level genome assembly of the planthopper Nilaparvata muiri.
Wang, Cilin; Luo, Ju; Wang, Aiying; Yang, Guiying; Tang, Jian; Liu, Shuhua.
Affiliation
  • Wang C; State Key Laboratory of Rice Biology and Breeding, China National Rice Research Institute, Hangzhou, China.
  • Luo J; State Key Laboratory of Rice Biology and Breeding, China National Rice Research Institute, Hangzhou, China.
  • Wang A; State Key Laboratory of Rice Biology and Breeding, China National Rice Research Institute, Hangzhou, China.
  • Yang G; State Key Laboratory of Rice Biology and Breeding, China National Rice Research Institute, Hangzhou, China.
  • Tang J; State Key Laboratory of Rice Biology and Breeding, China National Rice Research Institute, Hangzhou, China.
  • Liu S; State Key Laboratory of Rice Biology and Breeding, China National Rice Research Institute, Hangzhou, China. liushuhua@caas.cn.
Sci Data ; 11(1): 1029, 2024 Sep 19.
Article de En | MEDLINE | ID: mdl-39300212
ABSTRACT
The Nilaparvata muiri (Hemiptera Delphacidae) is a sibling species of a destructive rice insect pest, the brown planthopper (BPH), Nilaparvata lugens. Here, we generated a high-quality chromosome-level genome assembly of N. muiri using a combination of the PacBio HiFi sequencing, Illumina short-read sequencing and Hi-C scaffolding technologies. The genome assembly (524.9 Mb) is anchored to 15 pseudochromosomes, with a scaffold N50 of 43.3 Mb and 99.1% BUSCO completeness. It contains 188.1 Mb repeat sequences and 13204 protein-coding genes. As a closely related species within the same genus as the significant pest, N. lugens, the chromosome-level genome assembly of N. muiri will provide important support for the better analysis of pathogenicity mechanisms of N. lugens based on comparative genomics.
Sujet(s)

Texte intégral: 1 Collection: 01-internacional Base de données: MEDLINE Sujet principal: Génome d'insecte / Hemiptera Limites: Animals Langue: En Journal: Sci Data Année: 2024 Type de document: Article Pays d'affiliation: Chine Pays de publication: Royaume-Uni

Texte intégral: 1 Collection: 01-internacional Base de données: MEDLINE Sujet principal: Génome d'insecte / Hemiptera Limites: Animals Langue: En Journal: Sci Data Année: 2024 Type de document: Article Pays d'affiliation: Chine Pays de publication: Royaume-Uni